Corynebacterium massiliense: CMASS_04395
Help
Entry
CMASS_04395 CDS
T08886
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cmas
Corynebacterium massiliense
Pathway
cmas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMASS_04395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmas03021
]
CMASS_04395
03019 Messenger RNA biogenesis [BR:
cmas03019
]
CMASS_04395
Transcription machinery [BR:
cmas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CMASS_04395
Messenger RNA biogenesis [BR:
cmas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CMASS_04395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WCZ32329
UniProt:
A0ABY7U6K6
LinkDB
All DBs
Position
928459..930399
Genome browser
AA seq
646 aa
AA seq
DB search
MSETDNNAAKDLASLKLPELRKMAADKGLRGVSGLRKGDLITAIKTGKVPAKKIAAAAAA
DAAAGEADAEPKSRGRNRGDKAPAADSDGGARDSKGQDAKGRDNGDGHDGGDREGRDRDG
NDRDGNDRPRYETRAQARRARRNRMRNNQAGDNHDHGAGDKVGNDHHGDRGDRNDRNNRN
NHDDRGGDNGDNGQQNNGDGNGNGNGNGHNGNGRGDRNDRGDRNDRGGRRGRRNRRNRRN
RGGRGGGGDDLQIREGDELQAVGGILEVVDNNVAFLRTGGYRAGASDVFVNHNLVRKLGL
RSGDALTGQVKVGATHTHGNGRNRRKYNQLVRVDSVNGMDPEQAKQRPEFGKLTPLYPNK
RLRLETEPKVLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNVANAIATNNPECYLMV
VLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTSVAELAIERAKRLVEQGKDVVVLLDS
ITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEEGGSLTIIATAMVETGST
GDTVIFEEFKGTGNAELKLDRGIAERRVFPAVDVKPSGTRKDELLLVPEEARIMTKLRRI
LSGLESQQAIDLLIKQLKKTKSNGEFLMGVASSAPMAADKDEEDYS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagacggacaataacgcagccaaggacttggcatcgctgaaactgccggaactg
cgcaagatggccgccgacaagggactccgcggcgtctccggtctgcgcaagggggatctc
atcaccgcgatcaagaccggcaaggtcccggcgaagaagatcgcggccgccgcggctgcc
gatgcggcagcgggcgaggcagacgcagagccgaaatcccgcggccgaaaccgaggggat
aaggcgccggccgccgactccgacggcggcgctcgtgacagcaagggccaggacgccaag
ggccgggacaacggcgacgggcacgacggtggcgaccgtgaggggcgcgatcgcgatggc
aacgaccgcgatggcaatgaccgcccgcgctatgagacccgcgcgcaggcccgtcgcgcc
cgccgcaaccgcatgcgcaacaaccaggctggggacaaccacgaccacggcgccggcgac
aaggttggcaatgaccaccacggtgaccggggcgatcggaatgaccggaacaaccggaac
aaccacgatgaccgcggtggcgacaacggcgacaacggtcagcagaacaatggtgacggc
aacgggaacgggaacggcaatggccacaatggcaatggccgcggcgaccggaatgaccgg
ggtgaccgtaatgaccgcggtggccgccgaggtcgccgcaaccgccgtaaccgtcgtaac
cgcggcggccggggtggcggcggagacgatctgcagatccgcgagggcgatgagctgcag
gccgtcggcggcatcctggaagtggtggacaacaacgttgcgttcctgcgcaccggcggc
taccgcgccggtgccagcgacgtctttgtcaaccacaacctcgtgcgcaagctggggctg
cgctccggcgatgcgctgaccggccaggtcaaggtcggcgcgacccacacgcacggcaac
ggccgcaaccgccgcaagtacaaccagctcgtgcgcgtcgattccgtcaacgggatggat
ccggagcaggccaagcagcgcccggagtttggcaagctcaccccgctgtacccgaacaag
cgcctgcggctggaaaccgagccaaaggtgctgaccacgcgcgttatcgacctcatcatg
cccatcggtaaggggcagcgcgcgctgatcgtctccccgccgaaggccggtaagaccacc
atcttgcagaacgtggccaacgcgattgccacgaacaacccggagtgctacctcatggtt
gtcctcgtcgacgagcgtccggaagaggtcaccgacatgcagcgctcggtcaagggcgag
gtcatcgcctccaccttcgaccgcccgccgtcagagcacacgtccgtggcggagctcgcc
atcgagcgcgccaagcgcctggtggagcagggcaaggacgtcgtggtcctgctcgactcg
ataacccgcctgggccgcgcgtacaacaactcctcgccggcctccggccgcatcctgtcc
ggcggtgtggactccaacgcgctctacccgccgaagcgctttttgggtgctgcccgcaac
atcgaggagggcggctcgctgacgattatcgccaccgccatggtggagaccggctccacc
ggcgacacggtcatcttcgaggagttcaagggcactggtaacgcggagctcaagctcgac
cgcggcatcgccgagcgccgcgtcttcccggccgtggacgtcaaaccgtccggcacccgc
aaggacgagctgctgctcgtgccggaagaggcgcgcatcatgaccaagctgcgccgcatc
ctgtccggcctggaatcccagcaggccatcgatcttttgatcaaacagctgaagaagacc
aagtccaacggtgagttcctcatgggcgtggccagctccgcgccgatggccgccgataaa
gacgaggaggactactcctaa
DBGET
integrated database retrieval system
