Corynebacterium massiliense: CMASS_06965
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Entry
CMASS_06965 CDS
T08886
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cmas
Corynebacterium massiliense
Pathway
cmas03030
DNA replication
cmas03430
Mismatch repair
cmas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMASS_06965 (dnaE2)
03430 Mismatch repair
CMASS_06965 (dnaE2)
03440 Homologous recombination
CMASS_06965 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmas03032
]
CMASS_06965 (dnaE2)
03400 DNA repair and recombination proteins [BR:
cmas03400
]
CMASS_06965 (dnaE2)
Enzymes [BR:
cmas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMASS_06965 (dnaE2)
DNA replication proteins [BR:
cmas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMASS_06965 (dnaE2)
DNA repair and recombination proteins [BR:
cmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMASS_06965 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WCZ32827
LinkDB
All DBs
Position
complement(1482301..1485885)
Genome browser
AA seq
1194 aa
AA seq
DB search
MAKNSSFVHLHNHTEYSMLDGMAKVDLLAEEVARQEMPAVGMTDHGNMFGSDAFFRKMKA
TGIKPIIGIEAYMAPGSRFNKKRVRWGTPDQKRDDVSASGAYLHQTMIAENVTGLRNLFK
LSSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFEEALEAAAMWQ
DIYGKDNYFLELMDHGLDIEKRTRDGLLEIGRKLDLPPLVTNDCHYVLESQASSHEAMLC
VQTGKTFMDPDRFKFGGTGYYIKSAKQMRELWDDMVPDGCDNTLWIAERVGDYDEVWEEH
PHDRMPIADVPEGETPTSWLTKEVMRGLEDRFPGKEVPQEYIDRAEYEISVIDMKGYPSY
FLIVAELIKYARSVGIWVGPGRGSAAGALVAYALTITNIDPIEHDLIFERFLNPERPSAP
DIDIDFDDRRRGEMITYAAERWGEDKIAQVITFGTVKTKQAIKDSAKVHFGQPGFQMADR
INGALPAPIMAKDIPLKGITDPDHERYSEAAEVRTMVETDPDVKKIYDTARGLEGVIRQA
GVHACAVIMASVRLLDHIPMWKRNADGAIITGWDYPACEAIGLLKMDFLGLRNLTVIGDA
LDNVRKNRGEEVKLEELHADAPEVSKVYELLSRGDTLGVFQLDSGGMQELLKRMKPTEFK
DIVASLALYRPGPMGVNAHWEYADRKNGRKPITPIHPELDEPLKDILAETYGLIVYQEQI
MRISQKVANYTAGEADKFRKAMGKKKPEVLAQQYEKFSGGMFDNGYSKEAVDALWGTIEP
FASYAFNKSHAAGYGLVSFWTAYLKAYYAPEYMAALLTSVGDKKDKSAIYLADCRHLGIN
VLPPDVNQSAENFEAVEDDIRFGMGAIRNVGSEVVESIIKSREEKGEYRSFSDYLDKIEL
AACSKRVTESLIKAGAFDSLGHPRKGLMLIHEDAVDAVQTTKKAADKGQFDLFAGLGGGD
GADADGGAKNAFAIDIPDEHWERKHELALEREMLGLYVSGHPLDGFEDALDAQTDTPLPK
ILSDEVRNNQDVIIGGIISSVDRRFSKKDGSPWAIVTVEDHHGAQVEILVFNKVYSLVAP
QIVEDNIILAKAQVRYRDDRRSLFCNDIRVPDLGPGGGAGLPLRLTMRTDQCTMNNIARL
KDVLLKNSGDSSVYLTLVDGENQTQLILGDHLRVERNSNLMGDLKASMGPGILG
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaactcctccttcgtgcatctgcataaccacaccgaatattccatgttggat
ggaatggccaaggtggatctgctcgcggaggaggtcgcccgccaagagatgccagcggtg
ggcatgaccgaccacggcaacatgtttggctccgacgcctttttccgcaagatgaaagcc
accggcatcaagccgatcatcggcatcgaggcgtacatggcgcctggatcgcgcttcaac
aagaagcgcgtgcggtggggaactccggatcaaaagcgtgacgatgtctccgcgtccggt
gcctacctccaccagacgatgatcgcggagaacgtcacgggcctgcgcaacctgttcaaa
ctgtcctcgctggcctcctatgaggggcaattgggtaagtggccccgcatggacgccgag
ctcatcgcggaacacgccgacgggattatcgccacgaccggctgcccgtcgggcgacgtc
cagacccgcctgcggctgggccagttcgaggaggcactcgaagccgccgcgatgtggcag
gacatctatggcaaggataattacttcctcgagctgatggaccatgggctggacatcgaa
aagcgcacgcgcgacggcctgttggagatcggccgcaagctggacctcccgccgctggtg
accaacgactgccactacgttctcgaatcgcaggcgtcgagccacgaggcgatgctgtgt
gtgcagaccggcaagaccttcatggatccggaccggttcaagttcggcggcacgggctac
tacatcaagtccgcgaagcagatgcgcgagctgtgggatgacatggtcccggacgggtgc
gacaacaccctgtggatcgcggagcgcgtgggcgactacgacgaggtgtgggaggagcac
ccgcacgaccgcatgcctatcgcggacgtcccggagggtgaaaccccgacgtcgtggctg
accaaggaggtcatgcgcggcctggaggatcgttttccgggcaaggaggtcccgcaggag
tacattgaccgcgctgaatacgaaatcagcgtcatcgacatgaagggctacccgtcctac
ttcctcatcgtcgcggagctgattaagtacgcgcgctcggtgggtatctgggtcggcccc
ggccgtggttccgcagccggtgcgttggtggcgtacgcgctgaccattaccaacattgat
ccgattgagcacgacctcattttcgagcgtttcttgaacccggagcgcccgtccgcgcct
gatatcgatatcgacttcgacgatcgccgccgtggcgagatgatcacctacgccgccgaa
cgctggggcgaggacaagattgcgcaggtcatcaccttcggcacggtgaagaccaagcag
gcgattaaggactcggcgaaggtgcacttcgggcagccgggcttccagatggccgaccgc
atcaacggcgcgctgccggcgccgatcatggcgaaggatattccgctcaagggcatcacg
gacccggatcacgagcgctactcggaggctgccgaggtccgcacgatggtggaaaccgat
ccggacgtcaagaagatctacgacaccgcccgcggcctggagggcgttatccgccaggcc
ggcgtgcacgcctgtgcggtgattatggcgtcggtgcgcctgctcgatcacatcccgatg
tggaagcgcaacgccgacggcgcgatcatcaccggctgggactacccggcctgcgaggcc
atcggtctgctgaagatggactttctgggcctgcgcaacctcaccgttatcggcgatgcg
ttggataacgtgcgcaaaaaccgtggggaagaggtcaagctggaagagctccacgccgat
gccccggaggtgtctaaggtctacgagctgctctcgcgcggcgacaccctgggcgtgttc
cagctggactccggtggcatgcaggagctgctcaagcgcatgaagccgaccgagttcaaa
gatattgtcgcgtcgctggcgctctaccgcccgggcccgatgggcgtgaacgcgcactgg
gagtacgcggaccgcaagaacggccgcaagcccatcacgccgatccaccccgagttggac
gagccgctcaaggacatcctggcggagacctacggtctcattgtgtaccaggagcagatc
atgcgtatctcgcagaaggtggctaactacacggccggcgaggcagataagttccgtaag
gccatgggtaaaaagaagccggaagtgctggctcagcagtacgagaagttctcgggcggc
atgttcgacaacggctactccaaggaagcggtggacgcgctgtggggcactatcgagccg
ttcgcctcctacgcgttcaacaagtcgcacgcggcgggctacggtctcgtgtcgttctgg
accgcctacctcaaggcctactacgccccggagtacatggcggcgcttctgacctcggtg
ggcgataagaaggacaagtccgccatctacctggcagactgccggcacctgggcattaac
gtgcttcccccggacgtcaaccagtcggcggagaacttcgaggctgtcgaggacgacatt
cgcttcggcatgggtgctatccgcaacgtcggatccgaggttgtggagtccatcattaaa
tcccgcgaggaaaagggcgagtatcggtccttctcggactacttggacaagattgagctc
gccgcgtgttcgaagcgcgtgaccgaatctctcatcaaggccggcgccttcgattctctg
ggccacccgcgcaaggggctcatgctcatccacgaggatgcggtggatgctgtgcagacg
acgaagaaggccgcggacaaagggcagttcgatctcttcgccggcttgggcggtggggat
ggcgccgatgcggacggcggggcgaaaaacgcgttcgccatcgacatcccggacgagcac
tgggagcgcaagcacgagctggccctggagcgcgaaatgctgggcttgtacgtctctggc
caccctctcgacggtttcgaggacgcgctcgatgcgcagacagacaccccgctgccgaag
atcctctccgacgaggtgcgcaacaaccaggacgtcatcatcggcggcattatctcgtcg
gtggaccggcgcttttccaagaaggatggctcgccgtgggccatcgttaccgtggaagac
caccatggcgcccaggtggagatcttggtgttcaacaaggtctactccctggtcgcgccg
cagatcgtggaggacaacatcatcctggccaaggcccaggtgcgctaccgcgacgaccgc
cgctcactgttttgtaacgacatccgcgtgccggatctgggcccaggcgggggagcgggc
ctgccgctgcgcctgacgatgcgcaccgatcagtgcacgatgaacaacatcgcgcgcctg
aaagacgtgctgctgaaaaactcgggcgactcgagcgtgtacctgaccctggtagacggg
gagaaccagacccagctcatcctcggcgaccacctacgcgtcgagcgcaacagcaatctg
atgggcgatctcaaggcctcgatggggccgggaatattagggtag
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