Corynebacterium massiliense: CMASS_07905
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Entry
CMASS_07905 CDS
T08886
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cmas
Corynebacterium massiliense
Pathway
cmas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMASS_07905 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmas03019
]
CMASS_07905 (rng)
03009 Ribosome biogenesis [BR:
cmas03009
]
CMASS_07905 (rng)
Enzymes [BR:
cmas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CMASS_07905 (rng)
Messenger RNA biogenesis [BR:
cmas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CMASS_07905 (rng)
Ribosome biogenesis [BR:
cmas03009
]
Prokaryotic type
rRNA processing factors
CMASS_07905 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
WCZ33011
UniProt:
A0ABY7U9E3
LinkDB
All DBs
Position
complement(1688371..1692237)
Genome browser
AA seq
1288 aa
AA seq
DB search
MAAKKTETKKAARKSGAKKASASQAMGAKAWESAASFAAKINRDELPAKTRVHALAKQLG
IASKQLVSILADQGVKKMAQSTLTPDQVGDVLDHIAAQAQQDDAGAKPAKKADAKKKSSA
KKVAKKSAAKKAEKPAKKSTAKNAAAEESNAADEEAANENAQQEEAAQTEKPARRRKRRA
TKKSAPRAQARKVEAADAEQATADDEAATTGGSTTDDAAADADTAAIAEEKLRTRVRKNV
ANELSQIREKVDAELSEGGAETADANASVNADSADDESEDTKLRLHVRNNVANEIAQIEK
RVEEELAAEEDDSFNDESYPVILPGAPGSDEGEDAGSGDANADADADADWDAADSDSDSE
REDTDGYDYAPIFLAPTVDDGPTGEGDADEDYDDEVDEALDAVVAAAENSDNQGGRRRRG
RRGTSRGRGAAKGSAKGAFQSTGKDEPARDDNGVEIIDEPKAIRGSTRIEARRRRRAEMR
DRGRERTHIVSQAEFLARRESVERLMVVRDRKRDDGPGLITQVGVLEDGLLVEHFVTSEA
QASIIGNIYLGRVQNVLPSMEAAFVDIGTGRNGVLYAGDFDWRGTGLGGRARKIENALKS
GDQVLVQVSKDPLGHKGARLTTQISLAGRFLVYVPKGKNAGISRKLPAPERKRLKDILGR
VVPDDGGAIIRTAAENVSEEAIATDVRRLHDRWEDIRATAKKEKESKGAKPVALYEEPDM
LIKVVRDLFNEDFNKLIVDGKRAYNTVDAYVNSMAPDLSDRVVRFDRRAHDGDDAFAAYR
VEEQLHKALSRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEETVTKNNLEAAEE
IVRQMRLRDLGGMIVVDFIDMVLPENQELVLRRLKEAWGRDRTRHQVSEVTSLGLVQMTR
KRLGTGLLETFSTECEHCHGRGIIVHDDPVDEAEDSGLGAGAQHGASRDDDSRNRRGSRS
DRNDRGDRNGRKDRKERRDQRDHRDHRDRRDKDQKKGRKHAPHGLDDTHESAPSGANTSG
ADTSIEDLADSVIGKRGDDTQKCKRRGKKGSRNADAVSEIESIAHAAVETAMDAEKAEGG
DDAARAEDAGNAQTYEEAVAEFERSPRRKRRTRGNSRSDRRPRPEDFEHADGSAADEADS
RGDDEPAAESSRREDRPAGARRRRRRAVRQAARRARRGSQQDAADWDETGQEGAGDGALR
GQRGGEDKDRDANDGKDASSRRRRGRRRATRSSRKGSGEQPASQDRQGQRSAAGSRGRNG
SGKKADRDAANDSRRPKRRGRRRATRRD
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaagaagacagaaactaagaaagcggcacggaagtcgggggcaaagaaggcc
tcggcgtcgcaggcgatgggggctaaggcgtgggagtccgccgcgtcttttgctgcgaag
atcaatcgtgatgagctgccggctaagacgcgcgtgcacgccctagccaagcaattgggc
atcgcgtccaagcagctggtgagcatcctggccgaccagggtgtgaagaagatggcgcag
tccacgctgacgccagaccaagtgggcgacgtgctcgaccacatcgcagcgcaggcgcag
caggatgatgccggagccaagccggccaagaaggcggacgccaagaaaaagtcctccgcg
aagaaggtcgcgaaaaaatctgcagcgaagaaggcggaaaagccggcgaagaagtccaca
gcaaagaacgcggcggcagaagaatcgaacgcggcggacgaggaagccgctaacgagaac
gcgcagcaggaagaggcggcgcagaccgaaaagccggcgcgccgccgcaagcgccgggcg
acgaagaagtctgcaccgcgtgcgcaggctcgcaaggttgaggccgcagacgccgaacag
gcgaccgccgacgacgaggcagccaccaccggcggtagcaccactgacgatgccgccgcg
gacgccgataccgccgccattgccgaagaaaagctgcgcacgcgcgtgcgcaagaacgtg
gccaacgagttgtcgcagatccgcgagaaggtggatgcggagctgtccgagggcggggcg
gagaccgcagacgcgaacgccagcgtcaatgcagattccgcggatgacgagtccgaggac
acgaagctgcgcttgcacgtgcgcaataacgtggccaacgagatcgcgcagattgaaaag
cgggtcgaggaggagctcgcggcagaagaagacgactccttcaacgatgagtcctacccg
gtcatcctcccgggtgccccggggtcggatgagggagaagacgcaggctctggcgatgcg
aacgcggacgcagacgcggacgcggattgggatgcggccgattccgactccgactccgag
cgggaggacaccgacggctacgactacgccccaattttcctggccccgacggtggatgac
ggtccgacgggggagggcgacgccgacgaggactacgacgacgaggtcgacgaggcgctc
gacgctgtcgtggccgctgcggaaaactccgacaaccaaggcgggcgccggcgccgcggg
cgccgcggcacctcgcggggcaggggagccgccaagggatccgcgaagggcgcattccag
agcaccggcaaggacgagcccgcgcgcgacgacaacggcgtggagatcatcgacgagccc
aaagccatccgcggctccacccgcattgaggcgcgccgccgccggcgggcggagatgcgc
gaccgcgggcgcgagcgcacccacatcgtctcccaggcggagttcctcgcgcgccgggag
tcggtggagcggctcatggtggtccgcgatcgcaagcgtgacgatggcccgggccttatc
acccaggtcggcgtcttggaggacgggctgctcgtcgagcacttcgtgacctcggaggcg
caggcgtccatcatcggcaatatctacttgggtcgggtgcaaaacgtactgccgtcgatg
gaggcggcgttcgtggacatcggcactggccgcaacggcgtgctctacgcaggtgacttt
gactggcgcggcaccggcctgggaggtcgtgcgcgcaagatcgaaaacgcgctgaagtcg
ggtgaccaggttctggtccaggtgtccaaggatccgctggggcacaagggcgcgcgcctg
accacgcagatttccctcgctggccgtttcttggtgtacgtgccgaaggggaaaaacgcc
ggcatttcgcgcaagctgccggccccggagcgcaagcgtttgaaggacatcttgggccgc
gtggtgccggacgacggcggcgccatcatccgtacagccgcggaaaacgtctcggaggag
gccatcgccactgacgtgcgccgcctgcacgatcggtgggaagacattcgcgcgaccgca
aagaaggaaaaggagtccaagggcgcgaaaccggttgctctctacgaggagccggacatg
ctcatcaaggtcgtgcgcgacctgttcaacgaggacttcaacaagctcatcgtggatggc
aagcgcgcctacaacacggtggacgcgtacgtgaattcgatggcgccggacctgtccgac
cgcgtggtgcgcttcgaccgccgggcccacgatggcgacgatgcgttcgcggcctaccgc
gtggaggagcagctgcacaaggcgctgtcccggaaggtgtggctgccgtcgggcggcacg
ctggtcattgaccgcaccgaggcgatgaccgttatcgacgtcaacaccggcaagttcacc
ggctcgggcggcaacctggaagagacggtgaccaagaacaacctggaggcggcagaggag
atcgtccgccagatgcgcctgcgcgatctgggcggaatgatcgtggtcgattttatcgat
atggtgctgccggaaaaccaggagctggtgctgcgccgcctgaaggaggcgtggggccgg
gaccgcacccgccaccaagtctccgaggtcacctcactgggcctggtgcagatgacccgc
aagcgtctgggcaccggtttgttggagaccttctccaccgagtgcgagcactgccacggc
cgcggcatcatcgtccacgacgacccggtcgacgaggccgaggattccggcctgggtgcc
ggggcacagcacggcgcatcgcgtgacgatgattcccgcaaccgccgcggcagccgcagc
gaccgcaacgaccgtggcgaccgcaacggccgcaaggatcgaaaagaacggcgggatcag
cgggatcaccgggatcaccgggaccggcgggataaggatcaaaagaagggccggaagcac
gcgccgcacggcctcgatgacacccacgagtccgcgccttctggggcaaatacttccggg
gcggatacctctattgaggacctggcggatagcgtcatcggcaagcgtggcgatgacacc
cagaagtgcaagcgccgcgggaagaagggctcgcgcaacgctgacgcggtctcggagatt
gagtcgatcgcccacgccgcggtggaaacggcgatggatgcagaaaaggccgaaggtggc
gacgacgcggcccgcgctgaggacgcgggcaacgcccagacctatgaggaggccgtcgcc
gagttcgagcgctcgccgcgccgcaagcgccgcacccgcggcaactcgcggtccgatcgc
cgcccgcggccggaggacttcgagcacgccgacggctccgcggccgatgaggcggactcc
cgtggcgacgacgaaccggctgcggaaagctccaggcgcgaagatcgcccggcgggtgcg
cggcggcgccgtcgtcgtgcggtgcgccaggcggcgcgccgggcacgccgcggctcgcag
caggacgctgccgactgggacgagactggtcaggagggcgccggcgacggtgccctccgt
ggccagcgcggtggcgaggacaaggaccgcgacgccaacgacggcaaggacgcgtcgtct
cgtcggcgtcgcgggcggcgccgggccacccgctcgtcgcggaagggcagcggcgagcag
cccgcgtcgcaggaccggcagggacagcgttccgctgccggttcccggggccgaaacggc
agcggtaagaaggctgatcgcgatgccgcgaacgattcccgccggccgaagcgccgcggc
cgccggcgcgccacgcggcgcgactaa
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