Corynebacterium matruchotii: HBA49_01100
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Entry
HBA49_01100 CDS
T07153
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cmat
Corynebacterium matruchotii
Brite
KEGG Orthology (KO) [BR:
cmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmat03016
]
HBA49_01100
Enzymes [BR:
cmat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HBA49_01100
Transfer RNA biogenesis [BR:
cmat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HBA49_01100
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QIP44285
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All DBs
Position
complement(1145928..1147154)
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AA seq
408 aa
AA seq
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MALMSEFVTAPPEGTPQLIAGAAAIRQAADRLAQGTGWCAVDTERVSGFRYHNRVCLLQI
RRAGAGTMLIDVESDPQATTDFMGRVLTDTGWVVHAATSDLPYLEQLRLRPAQLFDTELA
GRFLGFHRVNLAAMVEHYLGVRLRKNHGGEDWSRRPIPSEWLDYAALDVEYLLPLADAMR
SELTQQSPKDEWVAEECDYLTRVYRGYSPTPKSWEDLKGVRRLRTSKQLQVARWLWQVRE
KLAQASDTAVSRLLPDKTLVALATELPTTVPKVMKTTGYPPRLRRKARYWANQVDKALRT
SRERWPEPFPIPTYRDKPPSRYTWSRYYPESFPTLTMVREELAHVAAQVGIPVENMIQSS
DTNEIVWRSQELKEVTDATELLELLRRLQVRPWQQKLCLPIFTSILLP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaatgtctgaattcgtgaccgcaccgccggagggcacaccacagcttattgcc
ggcgccgcggcgatcaggcaggctgccgaccggttggcgcagggcacgggttggtgcgca
gttgacaccgagcgggtatccgggtttcggtatcacaaccgggtgtgtttgcttcagatt
cggcgggccggtgcgggcacgatgctcatagatgtggaatccgacccccaggccaccacg
gatttcatgggtagagttttgaccgacaccggctgggtggtgcatgccgcgacgtcggat
ttgccatacctggaacagttacggctgcgaccagcgcagcttttcgacaccgagttagcc
ggccggtttttagggtttcaccgggtgaatttggcggcaatggtggagcattaccttggg
gtgcggttgcggaagaatcacggcggggaggattggtcccggcggccgataccgtccgag
tggttagactatgcggcattagatgtggaatatttattgccgcttgccgacgccatgcgc
agcgagctcacacaacaatctccgaaagacgaatgggtggcggaggaatgcgactattta
acccgggtctataggggctactcccccaccccgaaatcctgggaggacctcaagggggta
cgcagattacgaaccagcaagcagcttcaggtggcgcgctggttatggcaggtgcgggaa
aagttggcccaggcctcggacacggcggtttcgcggctgctgccggacaaaacattggtg
gcgttagccacggagttgccgacaaccgtgccgaaggtcatgaaaaccacgggctacccg
ccgagactgcgtcgcaaagctcgctattgggcaaaccaggtggataaagcgttgcgcacc
tcgcgggagcggtggccggagccgtttccgataccaacctaccgcgacaagccaccatct
cgatacacgtggtcacggtattacccggagtcgttcccgacgttaacgatggtgcgggaa
gagttggcgcacgttgctgcccaggtgggtattccggtggaaaatatgatccagtcatcc
gatacgaacgaaatcgtgtggcgcagccaggaactcaaagaggtgacggacgccacggaa
ttgctggaattattgcgaaggttacaggttcggccgtggcagcaaaaattatgcctgccg
atttttacttctatcctattgccgtag
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