Corynebacterium matruchotii: HBA49_01495
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Entry
HBA49_01495 CDS
T07153
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cmat
Corynebacterium matruchotii
Pathway
cmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBA49_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmat03019
]
HBA49_01495
Messenger RNA biogenesis [BR:
cmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HBA49_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QIP44352
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All DBs
Position
1047771..1049828
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AA seq
685 aa
AA seq
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MTEPRSRSRKVTRKAGPPEAAESPVFQAPTAAKTAAKTTPKNSKTGAPKTTTTKTGAAKT
ATKTTTSQKTGGSKTPKKTTGRGSGPVGRDNRNRRNVVKSMQGADLTGRLPLPKNPPKNG
LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIEDKIGNVD
ALVITHGHEDHIGAIPWLLKLRPDLPIIASKFTLALIAAKCREHHQRPKLIEVGNTSVEN
RGPFNLRFWAVNHSIPDCLGIAIKTKAGLVVMTGDIKLDQTPPDGRPTDLPALSRLGDEG
IDLFLCDSTNATTPGISGSESAIAPTLKRIVADAKQRVILACFASNVYRVQAAVDAAVAA
GRKVAFNGRSMIRNMEIAEKLGYLRVPRGTIVSMDDATKMAPHKVMLITTGTQGEPMAAL
SRMARREHRQITVRDGDVIVLSSSLVPGNEEAVFGVINMLAQIGATVITNKDANVHTSGH
GYSGELLFLYNAARPRNAMPVHGEWRHLRANKELAIATGVDRNQVVLAQNGVVVDMVNGK
ISVAGQIPVGNLYVDGVTMGDIDQEVLDDRTSMGEGGLISITAVIDNRTGRLLEHPTVHA
KGFSDDAKTMMPEVQNLVENTMNDLAAEGENDPYRMVQHLRRKVSRYVEQTWRRNPMIMP
TVVPMSSDVHSPIDDDEVKRSRPSL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccccgtagtcgttcccgaaaggttacccgtaaagcgggacccccggaggct
gctgaatcgccggtattccaggcacccaccgctgcgaaaaccgcagcaaaaaccacgccc
aaaaactcaaaaactggtgcgccgaaaaccaccacaaccaaaactggtgcggcaaaaacc
gccacgaaaaccaccacatcccaaaaaaccggcggctctaaaaccccgaaaaaaaccacc
ggtcggggttcgggacccgtcgggcgagacaaccgtaaccggcgcaatgtggtcaaatcc
atgcaaggcgccgacctgaccgggcggctgccccttccgaaaaacccacccaaaaacggg
ctgcgcatctacgccctcggtggtatatccgaaatcggccgcaacatgaccgttttcgaa
tataataaccgtcttctcatcgtggattgcggcgtgctttttccctcctccggcgaaccc
ggggtcgaccttatcctgcccgactttggccccatcgaagacaaaatcggcaatgttgac
gccctcgtcattactcacgggcatgaagaccatattggtgccatcccctggctgctgaaa
ctccggcccgacctgccgatcattgcctccaaattcaccctggccctgatcgccgccaaa
tgccgggaacaccaccagcgccccaaactcattgaggtgggtaacacctccgtggagaac
cgagggccattcaaccttcgcttctgggcggtcaaccactctatacccgactgcctcggc
atcgccattaagaccaaggcgggccttgtcgtcatgaccggtgacattaaacttgaccaa
accccaccagacggtcgacccaccgacctgccggccctgtcccgcctcggcgacgaaggt
atcgacctgttcctgtgcgactccaccaacgccaccacccctggaatctccggctccgaa
tccgccatcgccccaacccttaaacgcatcgtggcggatgcgaaacaacgcgtcatcctc
gcttgcttcgcctccaacgtgtaccgggtgcaggccgcggtggatgcggctgtcgctgcc
ggccgcaaggtggcctttaatggtcgctccatgatccgcaacatggaaatcgccgaaaaa
ctcggctaccttcgggttcctcgtggcaccattgtcagcatggatgacgccaccaagatg
gcgccccataaggttatgctcatcaccaccggtacgcagggtgaacccatggctgccctg
tcgcgcatggcgcgccgggagcatcggcagatcacggtgcgtgatggggatgtgattgtg
ctgagctcgtcgttggtgccaggcaatgaggaagcggtgtttggtgtgatcaacatgctg
gcccagattggtgccacggtgattaccaataaggacgccaacgtgcacacttcgggccac
ggctattccggggagttgctgttcctctataatgcggcgcggccgaggaatgccatgccg
gtgcatggtgaatggcggcatttgcgggccaataaggagctagccattgccaccggtgtg
gaccgaaaccaggtggtgttggcccaaaacggtgttgtggtggacatggtgaacggtaag
atttccgtcgccggccagatacccgtgggcaacctgtatgtggacggcgtgaccatgggt
gatatcgaccaggaggtgcttgacgatcgcacctcgatgggtgaagggggtctgatttcg
atcaccgctgtgattgacaaccgcaccggccgcctgttggagcacccaacggtgcatgcg
aagggcttctccgacgatgcgaaaaccatgatgccggaggtccaaaacctggtggagaac
accatgaatgatttggccgctgagggcgaaaacgatccctaccgcatggtgcagcacctg
cgtcggaaagtgtcacggtatgtggaacagacgtggcggcgtaaccccatgattatgccc
accgttgttcccatgagctcggacgtgcattcgcccatcgatgatgatgaggtgaaacgc
agccgccccagcctctaa
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