Corynebacterium matruchotii: HBA49_03640
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Entry
HBA49_03640 CDS
T07153
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cmat
Corynebacterium matruchotii
Pathway
cmat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HBA49_03640 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmat03019
]
HBA49_03640 (orn)
03009 Ribosome biogenesis [BR:
cmat03009
]
HBA49_03640 (orn)
Messenger RNA biogenesis [BR:
cmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HBA49_03640 (orn)
Ribosome biogenesis [BR:
cmat03009
]
Eukaryotic type
Pre-60S particles
RNases
HBA49_03640 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QIP44714
LinkDB
All DBs
Position
complement(587374..588003)
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AA seq
209 aa
AA seq
DB search
MADMDKHDRIVWIDLEMTGLDIHEHTIVEVAALITDADLNVLGEGVDVVVHASEEELGQM
NEFVTNMHESSGLLAEIRESKVTLKEAEDAVLELIAKHCDLEHPAPLAGNSIGTDRGFIR
EYMPRLDEALHYRMIDVSTVKELARRWAPRVYYHQPEKDMSHRALADIVESIRELDFYRR
VLFVANPRNQACESAQAAAIERYQEYLQP
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggccgatatggataagcatgatcgaattgtgtggattgacctggaaatgacgggtttg
gatattcacgagcacaccattgtggaggtggccgcgttgataacggatgcggatttgaat
gtgttgggtgagggggtggatgtggtcgtgcatgccagcgaggaagaattggggcagatg
aatgagtttgtgacgaacatgcacgagtcgtcggggctattggcggagattcgggagtcg
aaggtgactctcaaagaggccgaggatgcggtgttggagttgattgcgaagcattgtgac
ttagagcatccggcaccgttggcgggaaattcgattgggacggatcgggggtttattcgg
gagtatatgcccaggttggatgaggcgttgcattatcggatgattgacgtgtcgacggtg
aaggagttggcgcgcagatgggcgccacgggtgtattatcaccagccggagaaggacatg
tcgcatcgggcgttggcggatattgtggagtcgattcgggagctggatttttaccggcga
gtgttgtttgtagcgaatccgcgaaaccaggcgtgcgagtcggcgcaggctgccgcgatc
gaacgataccaggagtatttacaaccataa
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