Corynebacterium matruchotii: HBA49_11665
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Entry
HBA49_11665 CDS
T07153
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmat
Corynebacterium matruchotii
Pathway
cmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBA49_11665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmat03019
]
HBA49_11665
03009 Ribosome biogenesis [BR:
cmat03009
]
HBA49_11665
Enzymes [BR:
cmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HBA49_11665
Messenger RNA biogenesis [BR:
cmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HBA49_11665
Ribosome biogenesis [BR:
cmat03009
]
Prokaryotic type
rRNA helicases
HBA49_11665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
Cas3-like_C_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QIP46093
LinkDB
All DBs
Position
complement(1671703..1673868)
Genome browser
AA seq
721 aa
AA seq
DB search
MSITDDATGSAFEPDENNVVSESQETSQEVTPNPITLDEVVVEEPGGDDSRVADTSEATD
FDENDSEETPGTSFDTLGLPKPVVKAVENVGFETPSPIQAQTIPVLLDGHDVLGLAQTGT
GKTAAFALPILSLIDADIRHPQALILAPTRELALQVADSFQVFVDHLDGDISVLPIYGGQ
AYGIQLSGLRRGAQIVVGTPGRVIDHLEKGSLDISELRFLVLDEADEMLNMGFQEDVERI
LADTPEDKQVALFSATMPSGIRRLSKQYMNDPHEIQVKSETRTNTNITQRFLNVAHRNKL
DALTRILEVTEFEAMIMFVRTKFETEELAEKLRARGFNAAAINGDIAQQQRERTVEQLKD
GRLDILVATDVAARGLDVERISHVLNYDIPSDTESYVHRIGRTGRAGRSGEAILFVTPRE
RRFLRNIERATNAPLQEMELPTVDEVNESRKAKFADSITESLENTQVAVFRNLVKAYSEQ
HDVPLEDIAAALATQARAGDEFLMTEPPVEKRRNRRDRDRNDRGDRGYDRFDRDRDDRRG
GYNRGDRGDRGGRGRFDRGSQDMETYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRIT
IGSDFTLVELPKGLPKSVFDNLRDTRISGQLIHIEKDTGGRGRGGYNRGDRGDRDWDDRG
DRGGRGGYNRDRGNGGRNRDRGDWNDRRGGYNRGDRGDRGDRGDRDRGGYNRDRGDRDWR
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagtattaccgatgacgctaccggcagcgctttcgagccggatgagaataatgtagtg
tcggaatctcaggaaacttcgcaggaagtcacgcccaatcccatcaccctcgacgaagtg
gttgtcgaggaaccgggtggcgacgactccagggttgcggacacttctgaggccaccgac
tttgatgaaaatgactcagaagaaaccccaggcaccagctttgatacgctgggccttccc
aagcctgtagtcaaagcagtagaaaatgtggggtttgaaaccccgtcacccatccaagcc
caaaccatccccgtcctcctcgacgggcatgatgtgctcggcctggcccaaaccggcacc
ggcaaaaccgcagcattcgcgctgcccattttgtcgcttatcgacgccgacatccgccat
ccccaagcactcatcctcgcccccacccgggaactagccctccaggttgccgactccttc
caggtttttgtcgaccacctcgacggcgatatttccgtcctgcctatctatggtggccag
gcctacggcattcagctttccgggctgcgccgcggcgcccaaatcgtcgtgggcaccccc
gggcgggtcatcgaccacctggagaaaggctccctcgacatttccgaactgcggttcctc
gtccttgacgaggccgacgaaatgctcaacatgggcttccaggaagacgtggaacgcatc
ctcgcggacaccccggaagacaaacaagtcgcactgttctccgcaaccatgcccagcggg
attcgccggttgtcgaagcagtacatgaatgacccgcacgagattcaggtcaagtccgaa
acccgcaccaacaccaatatcacccagcggttcttgaatgtggcccaccgcaataagctg
gacgcgctcacccgcattctcgaagtcaccgaatttgaggccatgattatgtttgtgcgc
accaaattcgaaaccgaggaattggccgagaagctgcgcgcccgcggtttcaacgcggcc
gccatcaacggcgatatcgcccagcagcagcgcgaacgcaccgttgaacagctgaaggat
ggccgtctcgatattctcgtggccaccgatgtggccgcccgcggcctggacgtggaacgc
atctcccacgtgttgaactacgacattccttccgacacggaatcctatgtgcaccgcatt
ggccgcactggacgtgccggtcggagcggtgaggcgattttgttcgtcaccccccgggag
cgccgcttcctgcggaatattgagcgggccaccaatgcgcccctgcaggaaatggaattg
cccaccgtcgacgaggtcaatgagtcccgcaaggccaagttcgcggactccatcaccgaa
tctttggaaaacacccaggtggcggtgttccgtaacctggtcaaggcctattcggagcag
cacgacgtgccgctggaagacattgccgcagccctggccacccaggcccgggccggtgac
gaattcctgatgacggagccgccggtggagaagcgccgcaatcggcgagaccgcgaccga
aacgatcgcggcgaccggggctatgatcggttcgaccgggaccgggatgatcgtcgcggc
ggctacaaccggggcgatcgtggggatcggggcggccggggtcggttcgaccggggcagc
caagacatggaaacctaccggttggccgtgggcaagcggcagcatgtgcgcccgggcgcc
atcgtcggtgccttggcaaacgagggtggcctgtccaacaaggactttggtcgcatcacc
atcggttcggacttcaccctggtggaactgcccaaggggttgccgaagtcggtgtttgat
aacctgcgggacacccgcatttccggccagctgattcacattgagaaagacaccggcggc
cggggccgcggcggctacaaccggggcgatcgaggcgaccgtgattgggatgatcgcggg
gatcgcggcggtcggggcggctacaaccgcgaccggggtaacggtggccgaaaccgggac
cggggcgactggaacgatcgtcgcggcggctataaccggggtgaccgcggggatcgcggc
gaccggggtgatcgtgatcggggcggctacaaccgtgatcggggcgaccgcgactggcgg
gattaa
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