Corynebacterium matruchotii: HBA49_11935
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Entry
HBA49_11935 CDS
T07153
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cmat
Corynebacterium matruchotii
Pathway
cmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HBA49_11935 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmat03021
]
HBA49_11935 (rho)
03019 Messenger RNA biogenesis [BR:
cmat03019
]
HBA49_11935 (rho)
Transcription machinery [BR:
cmat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HBA49_11935 (rho)
Messenger RNA biogenesis [BR:
cmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HBA49_11935 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIP46134
LinkDB
All DBs
Position
complement(1607072..1609054)
Genome browser
AA seq
660 aa
AA seq
DB search
MTTTDNGAPRNLAAMRLPELRKLAADLGLKGVSALRKGALIAAITNASGDSPAPAADANA
AKPRQTRTPRRKDTKPVDDAPAAEADNALEASEDHKPRRRRAVRTEHPGDGRAGDDTADT
NTTSEDTHDGDTEGETRYESRSAQRRARRNRARREERENRGDRNERRQHSRTDTDDANTS
DNATTSGDADTEADSGDNHDRFDRGSDRTDRNDRSQRYDRNDRNDRNDRDDDRRGRRGRR
NRRGRDRDNDNYDNDNRNDNRDNQNSRDNRDDQLQVVAGILDVVDNNVAFVRTSGYHAGP
ADVYVNSQMVRRLGLRSGDAITGSVRMTDTNDRYNNNRGRNRQKYNPLARVDSVNGMTVE
EAKNRPEFNKLTPLYPNQRIRLETEPGILTTRVIDLIMPIGKGQRALIVSPPKAGKTTIL
QNIANAIATNRPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPAEHTAVAELAIE
RAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIE
NGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDIGPSGTRKD
ELLLAPEEARVMHKLRGILSVLDNQQAIDTLIAQLKKYKTNGEFLAQVAAQRAFMSNGED
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacaacagataacggcgcaccgcgaaatctcgctgcaatgcgtctacccgagctg
cgcaaactcgcagccgacctcggacttaaaggcgtatccgccctgcgcaaaggggcgctc
atcgccgccatcaccaacgcttccggcgacagtcccgcaccggcggccgacgccaacgcc
gcaaagccccggcaaacccgcaccccacgtcggaaagacaccaagcctgtcgacgacgcc
ccagcggcagaagcggacaacgcgcttgaggcctcggaagaccataaaccccgccggcgc
cgcgccgtccggaccgaacacccaggtgatggccgggccggcgacgacacagcagacacc
aacaccacatcggaagacacccatgatggtgacaccgagggggagacccgctacgaatcc
cgctccgcccaacgccgggcccgacgcaaccgggcccgccgggaagaacgcgaaaaccgg
ggcgatcgcaacgaacggcggcaacattcccgaaccgacactgatgatgccaacaccagt
gacaacgcaaccaccagcggcgacgccgacaccgaggctgattccggcgacaaccacgac
cgtttcgaccggggcagcgaccggacagaccgtaacgatcgaagtcaacgctacgaccga
aacgatcgcaatgatcgtaacgatcgggacgacgaccgccggggccgacgcggccgccgt
aaccgacgcggccgtgaccgagacaacgataactacgacaacgacaatcgcaacgacaac
cgggataaccaaaacagccgagacaaccgcgacgatcaactccaagtcgtcgccggcatc
ctcgacgtggtcgacaacaacgtggcattcgttcgcacctccggctaccacgccggcccc
gccgacgtctacgtcaatagtcaaatggtgcgccgcctcggtctccgctccggtgacgcc
atcaccggctccgtccgcatgaccgacaccaacgaccggtacaacaacaatcggggccgc
aaccggcaaaaatacaaccccctggcccgagtcgactctgtcaacggcatgaccgtcgag
gaagctaaaaaccggcccgagttcaacaaactcaccccgctttaccccaaccaacgcatc
cggttggaaaccgaacctggtatcctcaccacccgcgtaatcgacctcattatgcccatt
ggtaaaggtcaacgcgcactcatcgtatctcccccgaaggccggcaaaaccacaattttg
caaaacattgccaacgccatcgccaccaaccggcccgaatgctacctcatggttgtgctt
gttgacgaacgacccgaagaagtcaccgacatgcagcgcagcgtcaaaggcgaagtcatc
gcctccacattcgaccgcccaccggcagaacacaccgccgtggccgaactcgccatcgaa
cgagcaaaacgcctggtggaacaaggacaagacgtagtagtgctcctcgactccatcacc
cgattgggtcgcgcctacaacaactcatcccccgcatccggccgaatcctctccggtggt
gtcgactccaacgccctctacccgccgaaacgattcctcggtgccgcccgaaacatcgaa
aacggtggatcgctcacaatcatcgccaccgccatggtcgaaaccggctccgccggtgac
accgtgatcttcgaagaattcaaaggcaccggcaacgccgaactcaaactcgaccgcaaa
atcgcggaacggcgcgtcttccccgcagtagacatcggaccatccggcacccgcaaagac
gaactactgctcgcccccgaagaagcccgggtcatgcacaaactccgcggcatcctgtcc
gtgcttgataaccaacaagccatcgacacattgatcgcgcagctcaaaaagtacaagacc
aacggggaattcctcgcccaagtggcggcacagcgagccttcatgagcaatggggaggac
taa
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