KEGG   Corynebacterium matruchotii: HBA49_12110
Entry
HBA49_12110       CDS       T07153                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cmat  Corynebacterium matruchotii
Pathway
cmat03030  DNA replication
cmat03430  Mismatch repair
cmat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cmat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBA49_12110
   03430 Mismatch repair
    HBA49_12110
   03440 Homologous recombination
    HBA49_12110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmat03032]
    HBA49_12110
   03400 DNA repair and recombination proteins [BR:cmat03400]
    HBA49_12110
Enzymes [BR:cmat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HBA49_12110
DNA replication proteins [BR:cmat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HBA49_12110
DNA repair and recombination proteins [BR:cmat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HBA49_12110
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 DUF2779 DASH_Spc19
Other DBs
NCBI-ProteinID: QIP46166
LinkDB
Position
1571268..1571960
AA seq 230 aa
MDSLTQPFNPLKVLSFDLETTSANPFEARIVTSALVHIDSGGAHPQEFLADPGVPIPEAA
TKVHGITTEYAREHGSPHADVLAETIAAIRKAWTDGYTLIVYNASYDLTVLHSLEPGFLI
TGPVYDPYVMDKLLDPYRRGKRTLTALCEEYQVRLENAHEATSDALAAARIAWKQAKKRF
ASQISPQTMEQLMEFQAVGYYRSQNDFKKYLLGRGKDASDVNTAWPLQTP
NT seq 693 nt   +upstreamnt  +downstreamnt
atggatagtctcacccagcctttcaacccactcaaggttttaagcttcgatttagaaacc
acatcagcgaacccgttcgaagcccgcattgtcacctccgccctcgtacacattgactcc
ggcggagcccacccccaagaatttcttgccgacccgggcgttcccatccccgaggccgcc
accaaggtgcatggtattaccacggaatatgctcgggagcacggcagcccccacgcggat
gtgcttgcagaaaccatcgccgcaatcagaaaagcgtggacggatgggtacacactcatc
gtatataacgcatcatacgatttaacggtgctgcattcgctggagccggggtttctgata
accggaccggtctatgacccatatgtgatggataaactcctcgacccctaccgacgtggt
aagcggaccctcaccgcattatgcgaggaataccaggtgcgattagagaacgcacacgag
gcaactagtgacgccctagccgcggcgcggatcgcgtggaagcaggccaagaaacgattc
gcgtcacaaatcagcccccaaaccatggagcagctcatggagtttcaggcggtgggctac
taccggtcgcagaatgatttcaagaaatatttactcggccggggcaaggacgcgagcgac
gtgaataccgcctggccgctgcaaaccccctaa

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