Chitinibacter mangrovi: ABHF33_06015
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Entry
ABHF33_06015 CDS
T11125
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cmav Chitinibacter mangrovi
Brite
KEGG Orthology (KO) [BR:
cmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmav03016
]
ABHF33_06015
Enzymes [BR:
cmav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ABHF33_06015
Transfer RNA biogenesis [BR:
cmav03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ABHF33_06015
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
XBM01823
UniProt:
A0AAU7FDR3
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Position
1299600..1301450
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AA seq
616 aa
AA seq
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MNVFYEEDGSFKVASINDEQAASMQVEDARGKRSKIKTANVLLRFDRISLDDFFKSAQSL
AAEVDVNFLWECCGQDEFGFAEIAAEYFGANPSLTQQAAAAIALHTAPMYFYRKGKGRYK
AAPEENLKAAIAGLERKAREAEQMAAWEADLLAGILPQALQEKISRLIHRPDKNSLEYKA
LAQAAESAQTSTLRLLEKVGAIPDVAQYHLDGFLVEHFPKGRGFPATEPVFAPEDLPIAD
VQAFSIDDASTTEIDDAFSLKKLANGNWQVGIHIAAPVLGILPGSTLDQVVLDRLSTVYF
PGDKITMLPDDAVEVFTLQEGAARPAVSMYLEVSLGYDIISHRSLIERVPVVANLRHHDI
EPYFNEDTVGKEGEDYPWKAELTLLWNLAGALEGRRGKADQPQQQRLDYSFYIDREEGQA
ERVRIVPRKRGAPMDKLVAELMILVNSLWGANLRDAQIAGIYRSQGGGRVKLSTQPTAHA
GLGVDCYMWSSSPLRRAVDFINQQQLVAMIRNEKPRYQKNDAELFTAISSFDAAYAAYAD
FQDKMERYWCIRYLEQENMREFTAQVIKENLVRVDGMPLVLRVGGLPELPAGMTVSLQLI
KVDYLELAVEARIATI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttttacgaggaagatggcagctttaaagtcgccagcatcaatgatgagcag
gctgccagcatgcaagtggaagacgcacgcggcaaacgcagcaaaatcaaaaccgccaat
gtgctactgcgttttgatcgcatcagcctcgacgattttttcaaatcggcacagagcctc
gccgccgaagttgatgtcaatttcctgtgggaatgctgcgggcaagatgaatttggcttt
gccgaaattgccgccgaatactttggtgccaaccccagcctgacccagcaagccgccgcg
gccatcgcgctgcataccgcgccgatgtatttttatcgcaaaggcaaaggccgctacaaa
gctgcacccgaagaaaacctgaaagcggcgattgccggactggagcgcaaagcgcgtgaa
gccgagcaaatggctgcgtgggaagctgatcttctggcaggtatcttgccacaagccttg
caggaaaagatctctagactaatacatcgccccgacaaaaacagcctcgaatacaaagca
ctggcgcaagcggctgaaagcgcacaaacatcaacgctgcgcttgctagaaaaagtgggc
gcaattcccgacgtggcgcaatatcatctcgacggctttttggtcgagcatttccccaaa
ggtcgtggctttccggcgaccgagcccgtgtttgcgcctgaagatttgccgattgccgat
gtgcaagccttctcgattgacgacgcgagcacgaccgaaattgacgacgcattcagtttg
aaaaagctcgccaacggcaactggcaagtcggtatccacatcgccgcacctgtactcggt
attttgccaggctcaacgctagatcaagtcgtactcgatcgcttgtcgaccgtgtatttc
cccggcgacaaaatcaccatgctgcccgacgacgcagtcgaagtattcacattgcaagaa
ggcgcggcgcgcccggcggtgtcgatgtatctggaagtctcgctcggctacgacatcatc
agccatcgctcgctgatcgagcgcgtgcccgtggtcgccaatctgcgccatcacgatatc
gagccgtatttcaatgaagacaccgtcggcaaggagggcgaagactatccgtggaaagcc
gagctgacgctgctgtggaatctggctggcgcgctcgaaggccgtcgcggcaaagccgat
cagccgcagcaacaacgccttgattacagtttttatattgatcgggaagaaggccaagcc
gagcgcgtccgcatcgtaccgcgcaaacgtggtgcgccaatggataaactcgttgccgag
ctgatgattctggtcaacagcctgtggggagcgaatctacgcgatgcgcaaatcgccggc
atttatcgctcgcaaggcggtggccgcgtcaaactatcaactcaaccgactgcgcacgct
ggcctcggtgttgattgctatatgtggtccagctcgccgctgcgccgcgcggtcgatttc
atcaaccagcaacaactggtggcgatgatacgcaatgaaaagccgcgctatcagaaaaat
gacgccgagctgtttaccgcaatttcgtcgtttgacgccgcgtacgccgcttatgccgat
tttcaggacaaaatggagcgctactggtgcatccgttatctagaacaagagaatatgcgc
gaattcaccgcgcaagtgatcaaggaaaatctggtgcgcgttgatggcatgcctctggtc
ttgcgcgtgggcggcctgccagaactcccggctgggatgacagtctcactacagctgatc
aaggttgattatctggagctggccgtcgaagcccggatcgccaccatttaa
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