Chitinibacter mangrovi: ABHF33_10435
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Entry
ABHF33_10435 CDS
T11125
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cmav Chitinibacter mangrovi
Pathway
cmav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABHF33_10435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cmav02022
]
ABHF33_10435
02035 Bacterial motility proteins [BR:
cmav02035
]
ABHF33_10435
Two-component system [BR:
cmav02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ABHF33_10435
Bacterial motility proteins [BR:
cmav02035
]
Pilus system
Twitching motility proteins
ABHF33_10435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
Mg_chelatase
PG_1098_Fer
HTH_50
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XBL99489
UniProt:
A0AAU7F794
LinkDB
All DBs
Position
2196332..2197708
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AA seq
458 aa
AA seq
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MAKKSKVLPRVLVVDDEADLADLLELTLLKMGLDVVKANGVAVARTLLDSQRFDLCLSDM
RMADGEGLELVQHIHARKLDVPIAILTAYGSTNNAIAALKAGAFDYLAKPVSLEQLRTLV
RSALKLDAPEPASQSLPVDSPLLGSSPALLHVLALVDKLARNLAPVYITGESGSGKERAA
RLIHAKSARADKPFIAVNCGAIPETLMESEFFGYRKGAFTGANEDRDGFFQAAHGGTLFL
DEVADLPLAMQVKLLRVIQERKVRQVGGVAEVDVDVRIISATHQNLSRCVEAGKFRQDLY
YRLNVIELKMPPLREMGEDVLLIAQAVLKKIAQRHNMDEPVLQSDALVALRRYDFPGNVR
ELENLLERALALSDGMHIYAEDLHIQHSTADKAEAQAANLGDTYPLQDYLDRVEKAAILA
ALDKTNFNRTQAAKLLGITFRSMRYRLDRLGICQEGED
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaatctaaagtattgccgcgtgtgctggtcgttgacgatgaagctgatctg
gccgacttgcttgagctgaccttgttgaaaatggggctggacgtggtcaaggccaatggc
gttgccgtggccagaaccctgctcgatagccagcgttttgatctgtgcctgtccgatatg
cggatggccgatggcgaagggctggagctggtgcagcatattcatgcgcgcaagctggat
gtgccgattgccattctgaccgcttatggcagcaccaataatgctattgccgcgctcaaa
gcgggggcgtttgattatctggccaagccggtgtcgctggagcaattgcgtacgctggtg
cgctctgcgttgaaactcgatgcgcccgagcccgccagccagtccttaccggtagatagt
cctttgctcggcagctcgcccgcgctcttgcatgtgctggcgctggtcgacaagctggcg
cgcaatctggcgccggtttatatcaccggtgaatcgggttcgggtaaagagcgtgccgct
cggctgattcatgccaaatcggcgcgtgctgacaagccgtttatcgcagtcaactgcggc
gcgattcccgaaaccctgatggaaagcgagtttttcggctatcgcaagggcgcatttacc
ggcgctaatgaagaccgcgatggttttttccaggctgcgcatggtggcacgctatttctg
gacgaagtggccgatttgccgctggcgatgcaggtgaaattgctgcgcgtgattcaggag
cgcaaagtgcggcaggtgggcggtgtggccgaagtggacgtcgatgtacgcattatctcg
gccacgcaccagaatctgagccgttgcgtcgaggcaggcaaattcagacaagatttgtat
taccggctcaatgtgatcgagctgaaaatgccgccgctgcgcgaaatgggcgaagatgtc
ttgctgattgcgcaagcggtgctcaaaaaaatcgcgcagcgccacaatatggacgagccc
gtgctgcagtccgacgcgctcgttgcattgcgccgttatgattttcccggcaatgtccgc
gagctggaaaacctgctggaacgcgcattggcgctctccgatggtatgcatatttatgct
gaagacctgcatattcagcactccaccgctgataaggccgaggcgcaggcggcgaatctg
ggtgacacttatcccttgcaggattatctggatcgcgtggaaaaagctgcgattctggct
gcgctggataaaaccaatttcaaccgcacccaggcggccaaattgttgggcattactttt
cgcagcatgcgttatcgccttgatcggctcggtatttgtcaggaaggggaggattga
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