Chitinibacter mangrovi: ABHF33_12025
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Entry
ABHF33_12025 CDS
T11125
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cmav Chitinibacter mangrovi
Pathway
cmav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABHF33_12025 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmav03019
]
ABHF33_12025 (recQ)
03400 DNA repair and recombination proteins [BR:
cmav03400
]
ABHF33_12025 (recQ)
Enzymes [BR:
cmav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABHF33_12025 (recQ)
Messenger RNA biogenesis [BR:
cmav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABHF33_12025 (recQ)
DNA repair and recombination proteins [BR:
cmav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABHF33_12025 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-ProteinID:
XBL99786
UniProt:
A0AAU7F6T5
LinkDB
All DBs
Position
complement(2550477..2552291)
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AA seq
604 aa
AA seq
DB search
MQNTSPNTPALHCLEHVFGYRAFRGEQEQIVNTLCAGQDALVLMPTGGGKSLCYQIPALV
REGCAIVVSPLIALMQDQVEALKELGVAAAFLNSTLDASAARVVENDFLSGQLKLLYVAP
ERLMTTRFQSLLRQAHISLFAIDEAHCVSQWGHDFRPEYLALSILASDFPGIPRIALTAT
ADHATRAEMKQRLQLENAQEFVASFDRPNLRYTMVEKKTARDQLLTFLRREHEGDSGIVY
CLSRKKVEDTAAWLRSKEIRALPYHAGLDASTRAKHQQIFLREEGVVMVATIAFGMGINK
PDVRFVAHLDLPKSIENYYQETGRAGRDGLPANAWLAYGLNDVMLLAEMIEQGGSPEEQK
HVERRKLDAMLGLVEATECRRSVLLAYFGEEAASCGNCDNCLNPPQLVEMSQAAQKALSC
VYRTGNRFGVGHLVDVLRGKSNAKVISNLHDKISTFGIGKDIDEASWRAVFRQLLAKGAL
QLSPDGHGGLQLTDAARPFLKGENPLYLRARTEKFSYRGDKGSEFSSEADQALWQALRKL
RKQLADEIEAPAYHVFGDATLKEMVRLRPLDHYELSRISGVGDRKLEKYGDAFLRVLNEN
YLGL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacacctctcccaatacgcccgccctgcattgcctggaacacgtctttggctac
cgcgcctttcgcggcgagcaggagcagatcgtcaataccctgtgcgcagggcaagatgcg
ctggttctgatgcccactggcggcggcaaatcgctgtgctaccaaatccccgctttggtg
cgtgagggctgcgcgattgttgtctcaccgctgattgcgctaatgcaggatcaagtcgaa
gcgctcaaagaattgggcgtggcagccgcctttttgaattcaacgctggatgcctctgct
gcgcgcgtagtagaaaatgattttctctccggccagctcaagctgctctacgtcgcgccc
gagcgactgatgacgacgcgttttcagtccttgctgcgtcaagcgcatatttcgctgttt
gcgattgatgaagcgcattgcgtgtcgcaatgggggcatgatttccgccctgaatatctg
gcgctgtcgattctggcgagcgatttccccggcattccgcgcatcgcgctcaccgcaacg
gccgatcacgccacgcgcgccgagatgaaacagcggctgcagctggaaaacgcgcaggaa
tttgtcgccagtttcgatcggcccaatctgcgctacacgatggttgagaaaaaaacggct
cgcgaccaattgctaaccttcctgcgccgggagcacgaaggcgactcgggtattgtgtat
tgcctgtcgcgcaaaaaagtcgaagacaccgctgcgtggctgcgcagcaaggaaatcagg
gcactgccctaccacgctgggctcgatgccagcacgcgcgccaagcaccagcaaatcttc
ctgcgcgaagaaggcgtggtgatggtggcgacgattgcctttggcatgggcatcaacaag
cccgacgtacgttttgtcgcgcatctggatttgcccaaatcaatcgaaaactactatcag
gaaaccggccgcgccggccgcgatggtctgcccgccaatgcctggctcgcgtatggcttg
aacgatgtgatgttgctggccgaaatgatcgagcaaggcggcagcccggaggagcaaaaa
cacgttgagcgccgcaagctcgacgccatgctcgggctggtggaagccaccgaatgtcgt
cgttcggtgttgctggcctacttcggtgaagaggctgcatcgtgcggtaactgcgacaac
tgcctgaatccgccgcaactggttgaaatgtctcaggccgcacaaaaagcattatcgtgc
gtttatcgcaccggaaaccgctttggcgttggccatctggtcgatgtgttgcgcggcaaa
agcaatgccaaagtcattagcaatctccacgacaaaatcagcacctttggcatcggcaaa
gacatcgacgaagccagctggcgcgctgttttccgccaactgctcgccaaaggcgcattg
caactctcgcccgacggccacggcgggctgcaactcaccgacgcagcgcgcccattttta
aaaggcgaaaacccgctctacctgcgcgcgcgtaccgagaaattcagctatcgcggcgac
aaaggcagcgaattcagttccgaagccgatcaggcgctgtggcaagcattgcgcaaactg
cgcaagcagctggccgacgaaatcgaagcccccgcctaccatgtgttcggcgacgcaacg
ctcaaagaaatggttcgcctgcgcccgctcgaccattacgagctctcgcgcatcagcggt
gtgggtgatcgcaagctggaaaaatacggcgacgcatttttacgcgtactgaacgagaat
tatctggggctgtga
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