Chitinibacter mangrovi: ABHF33_14530
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Entry
ABHF33_14530 CDS
T11125
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cmav Chitinibacter mangrovi
Pathway
cmav03030
DNA replication
cmav03430
Mismatch repair
cmav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABHF33_14530 (holA)
03430 Mismatch repair
ABHF33_14530 (holA)
03440 Homologous recombination
ABHF33_14530 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmav03032
]
ABHF33_14530 (holA)
03400 DNA repair and recombination proteins [BR:
cmav03400
]
ABHF33_14530 (holA)
Enzymes [BR:
cmav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABHF33_14530 (holA)
DNA replication proteins [BR:
cmav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABHF33_14530 (holA)
DNA repair and recombination proteins [BR:
cmav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABHF33_14530 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
XBM00253
UniProt:
A0AAU7F957
LinkDB
All DBs
Position
complement(3077039..3078058)
Genome browser
AA seq
339 aa
AA seq
DB search
MRPDELPRALQRGLAPLYVIHGDEALLALEAAQHIRDAARQAGYSEREVLTVENAAHFQW
SQLQASGATMSLFAELRLLELRIPNGKPGTEGGKALESFASNLPSDILTIITLPKLDKTA
LNSKWMQALAKAGEVIEAKLIERSALPQWINQRLSLQGQSLADDAMTWLVDRVEGNLLAA
HQEIQKLALLHPKGVLTLAELEAAVANVARYDVFNLGEAVLSGDASRVCHMLAGLRAEGE
SPVLVLWALAEETRTLYKFAQGRSRGVAAAQLTKDLRIWGNKQRFIEAAASRVNAKRLKA
ALQLARRIDGLIKGIGDGDVWNEFTDLALLLINPGTQRI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgacgaactcccccgggcgctgcagcgcgggctggctccgctgtatgtcatc
cacggtgacgaggcgctgctggcgctggaagcggcgcaacacatccgcgatgcggcgcgt
caggcaggctatagcgaacgcgaagtactcacggtggagaacgccgcccattttcaatgg
tcgcagctgcaagccagcggcgcgaccatgtcgctttttgccgaactgcgcttgctggaa
ttgcgcattcccaatggcaagcccggcactgaggggggtaaagcgctggagagctttgcc
agcaaccttcccagcgatatactcaccattatcacgctacccaagctggacaaaactgca
ctcaatagcaaatggatgcaggcgctggcgaaagcgggcgaagtgatcgaagccaagctg
atcgagcgcagcgccctaccacaatggattaatcagcgccttagcctgcaagggcaaagc
ctggctgacgacgcgatgacctggctggtcgaccgcgtcgaaggcaatctgctcgcggca
catcaggaaatccagaaactcgccctgctgcaccccaaaggcgtcttgacgctggccgag
ctggaagctgcggtggccaatgtggcacgatacgacgttttcaacctcggcgaagcggtg
ctcagcggcgacgccagccgcgtctgccatatgctggccgggctgcgcgccgagggcgaa
tcgccagtgctggtgctctgggcgctcgccgaagaaacacgaacactgtacaaatttgcc
caggggcgctcgcgcggcgttgccgcagcgcagctgaccaaagatttgcgcatctggggc
aataagcagcgctttatcgaagcggcggccagccgcgtcaatgccaaacgcctgaaagcc
gccctgcagctcgcccgccggatcgatggcctgatcaagggcattggcgatggcgatgtc
tggaacgaattcaccgacctggctttacttctgatcaaccccggtacgcagcggatttaa
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