Cucurbita maxima (winter squash): 111465037
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Entry
111465037 CDS
T05246
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111465037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111465037
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
SR proteins
111465037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
Nup35_RRM_2
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
111465037
NCBI-ProteinID:
XP_022965059
UniProt:
A0A6J1HPZ2
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDL
ERHFDPYGKILSVRIRRNFAFVQYELQDDATRALELTNMSKLMDRVISVEYAVRDDDEKR
NGFSPDRNRDRSPDRKRRSPSPYRKERGSPDYGNGISPSPYRRQRASPDYGSRRSPSPYQ
RERERERGSPDYGRGRSPNQSPYRRERERSSDHGRGRSPNQSPYRRERERSRDHGRGRSP
NQSPYRRERERSSDHARAPSHSPPHQRERPNDDRVRDRSRSPYGRERGSPTTDGRGSSYS
PRDRERSNPDNGHDQRLNTVVAEPEPGDSPSYGGTTQSPKHRGYSSRSPQAEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattttttgtggaaactttgagtatgatgctcgacagcctgatttggagaga
ctgtttagtcgatatggaaaagttgatagagtagatatgaaatctggctttgctttcatc
tacatggaggatgagagagatgctgaggatgctatccgtgcacttgatcggagagaattt
ggtcgaaagggccgcagactacgtgttgagtggaccaaacaagaacgtgggattagaaga
cctggtggaggaggtggtggaggtggaggaggttcgaggagatcctctacgaatacaaga
ccttcgaagactttatttgttatcaactttgacccgtatcatactaggacaagagatttg
gagaggcacttcgatccttatggtaagatattgagtgtaaggattcgaaggaattttgca
tttgtccagtatgaattgcaagacgatgccactagagcattggagcttacaaacatgagc
aaattgatggatcgagtgatttcagtggaatacgctgttcgagatgatgacgagaagaga
aatggatttagtcctgataggaatcgtgataggtctcccgatagaaaacgacgatctcca
agtccctatagaaaagagcgaggaagtcctgattatggcaatggtattagccctagtcca
tataggagacaaagggctagtcctgattatggaagtcgtcgtagtccaagtccttatcag
agggagagagagagggagaggggttctcctgattatggtcgtggtcgtagtccgaatcag
agtccttataggcgagagagggagagatcaagtgaccatggtcgtggtcgtagtccgaat
cagagtccttataggcgagagagggagagatcacgtgaccatggtcgtggtcgtagtcct
aatcagagtccttataggagagagagggagagatcaagcgaccatgccagggcccctagc
catagccctccccatcagagggaaagaccaaatgatgaccgagtccgcgaccgaagccgc
agcccttacgggagagaaagggggagtcctactaccgatggacgtggcagtagctatagt
cctcgcgatagagagaggtcaaacccagacaatggtcatgatcagcggctgaacacagta
gtagccgaacccgaacccggggatagccccagttatggtgggacaactcagagcccaaag
caccgtggatatagcagccgttcaccacaagcagaggaatga
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