Cucurbita maxima (winter squash): 111465047
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Entry
111465047 CDS
T05246
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111465047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111465047
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
SR proteins
111465047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RNA_bind
Nup35_RRM_2
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
111465047
NCBI-ProteinID:
XP_022965075
UniProt:
A0A6J1HMP1
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIRALDRREF
GRKGRRLRVEWTKQERGIRRPGGGRGGGDSRRSSTNTKPSKTLFVINFDPYHTRTRDLER
HFDPYGKILNVRIRRNFAFVQYELQEDATRALEITNMSKLMDRVISVEYAVRDDDEKRNG
YSPDRTRDRSPDRKRRSPSPYRRERGSPDYGNGVSRSPYRKVRASPDYGSRRSPSPYQRV
RERGSPEYGRGRSPNQSPYRRERERERSSDHARAPSHSPYRRERERSSDHVRAPSHSPPP
HQRERPNGDRAHSGIHSPYGRERGSPTEEHRTSYSPRDRERSNPDNGHDQRPNTIAEPGD
SPSYGGTQSPKHRGYKSRSPQAEE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatcttttgtggaaactttgagtatgatgctcgacagcctgatctggaaaga
ctttttagtcgatatgggaaagttgatagagtagatatgaaatctggttttgcttttatt
tacatggaggatgagagagaggctgaggacgctatccgtgcacttgatcggagagaattt
ggccgaaagggtcgcagactacgtgttgagtggaccaaacaagagcgtggcattagaaga
ccaggtggtggcagaggtggaggagattcaaggagatcctctactaatacaaaaccttcc
aagactttatttgttattaactttgatccatatcatactaggacaagggatttggagagg
cacttcgatccttatggtaagatattgaatgtaaggattcgaaggaattttgcatttgtc
cagtatgaattgcaggaggatgccactagagcattggagattacaaacatgagtaaattg
atggatcgagtgatttcagtggaatatgctgttcgagatgacgacgagaaaagaaatggg
tatagtccagataggactcgtgataggtctcccgatagaaaacggcgatccccaagtccc
tatagaagagagcgaggaagccctgattatggcaatggtgttagccgcagtccatatagg
aaagtcagggctagtcctgattatggaagtcgtcgtagtccaagtccttaccagagagtg
agggagaggggttctcctgaatatggtcgtggtcgtagtcccaatcagagtccttacagg
agagagcgagagcgagagagatcaagtgaccatgccagggcccctagccatagtccttat
aggagagagcgagagagatcaagtgaccatgttagggcccctagtcatagtcctcctccc
catcagagggaaagaccaaatggtgaccgagcccatagcggaattcacagtccttacggg
agagagaggggcagtcctactgaagaacatcgaactagctatagtcctcgtgatagagag
aggtcaaacccggacaatggtcatgatcagcgaccaaatacaatagctgaaccaggggat
agccccagttatggtgggactcagagcccgaagcatcgggggtataagagccgttcacct
caagcagaggaatga
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integrated database retrieval system
