KEGG   Cucurbita maxima (winter squash): 111465064
Entry
111465064         CDS       T05246                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03030  DNA replication
cmax03410  Base excision repair
cmax03420  Nucleotide excision repair
cmax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111465064
   03410 Base excision repair
    111465064
   03420 Nucleotide excision repair
    111465064
   03430 Mismatch repair
    111465064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmax03032]
    111465064
   03036 Chromosome and associated proteins [BR:cmax03036]
    111465064
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111465064
DNA replication proteins [BR:cmax03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111465064
  DNA Replication Termination Factors
   ELG1-RFC complex
    111465064
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111465064
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111465064
  Check point factors
   HRAD17(Rad24)-RFC complex
    111465064
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Rad17 Mg_chelatase Viral_helicase1 RuvB_N AAA_11 DNAX_ATPase_lid RCF1-5-like_lid AAA_28 AAA_19 nSTAND3 AAA_assoc_2 AAA_30 AAA_24 AAA_5 AAA_25 RNA_helicase ABC_tran NTPase_1 bpMoxR SLFN-g3_helicase T2SSE AAA_18 MeaB DNA_pol3_gamma3 AAA_3 IstB_IS21 AAA_7 AAA_29 DO-GTPase1
Other DBs
NCBI-GeneID: 111465064
NCBI-ProteinID: XP_022965099
UniProt: A0A6J1HQ24
LinkDB
Position
Unknown
AA seq 333 aa
MASSSGSSSSSSYDMPWVEKYRPSKVADIVGNEEAVSRLQVIARDGNMPNFILSGPPGTG
KTTSILALAHELLGPNYKDGVLELNASDERGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGR
LMVVLQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPL
HVKNMVRNVLEGKFDDACAALKQLYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKEIG
FAHMRICDGVGSYLQLCGLLAKLSIVRETAKAP
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcgtcttcttcaggaagcagcagcagcagcagctacgacatgccatgggtggagaag
tacaggcccagcaaggttgctgacattgtgggcaatgaagaagcagtttctcggctccaa
gtcattgctcgcgacggcaacatgcccaatttcatattatctggtccgccaggaactggg
aagacaaccagtattctggctcttgctcacgagctcttgggaccaaattacaaggatggt
gttctggagcttaatgcatcagatgaaaggggaatagacgttgtgaggaacaaaatcaag
atgtttgctcaaaagaaagtaaccttgcctcctggtcgacacaaagtggtaatattggat
gaagctgacagcatgacaactggagcacaacaagctttgaggcgtacaatggaaatatat
tcgaacacaacacgttttgcacttgcatgtaatacctcctcaaaaattatcgagcctatt
cagagtagatgtgcaattgttcgattttcaagattaacagatcaagagattcttgggcgc
cttatggtggtacttcaagcagaaaaggtaccctatgttccagaaggtcttgaagcaatc
attttcaccgctgatggtgatatgaggcaagcgctgaataatttgcaagctacatatagt
ggattccgctttgtaaaccaggacaatgttttcaaggtttgcgatcaaccgcatccgctg
catgttaagaacatggtgcgtaacgtgcttgaaggtaaatttgacgatgcttgtgcagct
ctgaagcaactctacgacatgggctattctcccactgacataataaccactcttttccgt
attattaagaactatgatatggctgagtatctgaaactggaattcatgaaggaaattggg
tttgctcatatgagaatttgtgatggagttgggtcttatctgcagctatgcggtcttttg
gccaagctttccattgttcgtgagactgcgaaagcgccatga

DBGET integrated database retrieval system