Cucurbita maxima (winter squash): 111465201
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Entry
111465201 CDS
T05246
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03030
DNA replication
cmax03420
Nucleotide excision repair
cmax03430
Mismatch repair
cmax03440
Homologous recombination
cmax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111465201
03420 Nucleotide excision repair
111465201
03430 Mismatch repair
111465201
03440 Homologous recombination
111465201
03460 Fanconi anemia pathway
111465201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmax03000
]
111465201
03032 DNA replication proteins [BR:
cmax03032
]
111465201
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111465201
Transcription factors [BR:
cmax03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111465201
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111465201
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111465201
MMR (mismatch excision repair)
111465201
DSBR (double strand breaks repair)
HR (homologous recombination)
111465201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF223
CDC24_OB3
zf-CCHC_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
111465201
NCBI-ProteinID:
XP_022965290
UniProt:
A0A6J1HNA5
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAASMAPFKLTEGAVMVICKRESSEETFQPVVQVIDLKFVNTTQQSGSERYRLLLSDGTH
YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV
PATRSVSAAFSGNPQSSVGASSGSGIVGNVNVSGASFEQPKVNQSQVPHVGFHFNTPNSG
TRFNGSSPVTGSYGDQKMAYHNNGSDIPRSPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK
NEAPPRIMPITALNPYQGRWTIKARVTSKGELRDYNNPRGDGKVFSFDLLDAYGGEIRAT
CFDMVADQFYNQIESGNVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQPCFEDDQSI
PHQQFHFHHISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV
ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSNFNGKAVGTISTSQLFVEPDFPEA
RTLRGWFEKEGRSTPSVSISREVATVGRTDARQTISQIKDERLGTSEKPDWITVSATVSF
IKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL
TWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE
XRVKSTVMKAESINFLTESRFLLDLMEKFRAGNTIQNPGVFRPRSENIGGGQFVSPIRNS
TDVSREYGTPNRGVQYGDHHNSCRPTPSTLHNSRTYCNSCGGLGHSSMNCPSIISSPAPS
VGGGMYLNRVSGSSGRDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatcaatggcgccttttaagctgacggaaggagcagtgatggtgatatgcaag
cgagaatcgtcggaagagacgttccagccggttgtacaagtaattgacttaaaatttgtt
aacactacgcaacaatcgggcagcgagaggtacagattgttgctttctgatggaactcat
taccagcaaggaatgctgggcactcagctcaatggattggttaagtccgggaagttacag
aaaggttccatcgttcaattgcggcagtatgtttgtaatcccgttcaagaacgcctaatt
ataatcgtcattgagttggatgtgataaaggaaatgtgtgactttattggcgagcctgtt
ccagcaacaagatcagtatcagccgcatttagtggaaaccctcaatcctctgtgggggct
tcatccggcagcggaatagttggtaatgtgaatgtatctggtgcgtcttttgaacagcct
aaagtgaatcaatcacaagtaccgcatgtgggatttcattttaatactcctaattctgga
acaaggtttaatggttcatctcctgtaactgggtcatatggtgatcagaagatggcatac
cacaacaatggatcggatattcccaggtcacctctaaatgcttatgcttatgcccctcct
cagccaatacatcagcagccaccttcaatgtacagtaataggggaggaccggtagcaaaa
aatgaagctcccccaaggataatgcctattactgctctgaacccttaccaaggaaggtgg
acaataaaggctcgagttacttcgaaaggagaacttagagactacaataatcctcgtgga
gatgggaaagtgttttcatttgatctacttgatgcatacggtggagaaatacgagcaaca
tgcttcgatatggtagctgatcagttttacaaccagattgaatcgggtaacgtatacttc
atttctaaaggaagcttgaaacctgcacagaagaactataaccatctcaataatgacttt
gaaatatttcttgaaaacacatcaacaatccaaccttgctttgaggatgaccaatcaatc
ccccatcagcagtttcatttccatcacattagtgagattgagggcatggacagcaacagt
gttgtagatgtaattggtgttgtttcttccattaatcctgcaacgtctctcatgagaaaa
aatggtactgagactcagaagagatcccttcagttgaaagatatgtctggccgaagtgtt
gaattgactctttggggaaacttttgtcaagcagaagggcaaaaattgcaaaacatgtgc
gactcggggttgttcccagttttggctgtgaaatctggtagagtgagcaacttcaatggg
aaggcggtgggaaccatttcaacaagtcagcttttcgtagagccagatttccccgaggct
cgtacattaagagggtggttcgaaaaggaaggaaggagcactccttctgtctccatatcc
agggaagttgctaccgtgggtaggacagatgcccgtcagaccatatctcaaataaaagat
gagaggttaggaacctctgagaagccagattggatcactgttagtgcaactgtttcattc
attaaggttgataatttctgttacacagcatgtcctatcatgatcggggatcgtcaatgc
agcaaaaaggttacaaataacggagatggaaaatggagatgcgaccggtgtgatcagtct
gtcgacgaatgtgactacaggtacatattgcagctgcaaatacaggatcatactggctta
acttgggtgacagcatttcaagaaggcggtgaggagatcatgggcatacctgcaaaaaga
ttgtactatttgaaatacgaagaacaagatgatgaaaaatttgcagaaatcatccgtaaa
gttctttttacaaaatttattatgaagttgaaagtaaaggaagagacttttagtgatgaa
nncagagtgaaatcaacggtcatgaaagcagaaagcattaactttttgaccgagtccagg
tttcttctagacttgatggaaaagttcagggcagggaacaccatacagaatcctggagtt
tttcgccccagatcggagaatataggtggtggacagttcgtgtcacccattcgaaatagt
accgatgttagcagagaatatggtacaccgaaccgaggtgttcagtatggggaccatcac
aacagttgtaggcctactccatccacactgcataactcgcgcacgtactgcaacagctgt
gggggattgggtcacagctcaatgaactgtccgagtatcatcagcagccctgcgccatcc
gttggaggagggatgtacttaaatcgagtttcaggctcgtctggtcgtgactctggtgaa
tgcttcaaatgccatcaaaccgggcactgggctagggattgccctggtttggccactttc
cctccagcttatggtaacagtggcttcacagctaggtga
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integrated database retrieval system
