Cucurbita maxima (winter squash): 111465338
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Entry
111465338 CDS
T05246
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111465338
03036 Chromosome and associated proteins [BR:
cmax03036
]
111465338
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111465338
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111465338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Spt6_S1
Tex_central_region
HHH_9
SH2
HHH_3
Tex_N
S1
Motif
Other DBs
NCBI-GeneID:
111465338
NCBI-ProteinID:
XP_022965423
UniProt:
A0A6J1HNV8
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MGKAVISDEEDEVELDDREPLDGDDVDGRNMEDEEDEEDEEGQDEYEKDGFIVDDIEEED
EEDVEQREDSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARR
DNVEPSGFSDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGD
EDEMADFIVDEEVDEDGAPLRRRKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKR
ELDTHEWREKRLEDEFEPIVISEKYMTEKDDQIREIDMPERMQISEESTGPPPTMDERLE
DEEASWIHGHIANGMNSLFGNASGQDLSVTKGDILRFLDLVHVQKLDIPFIAMYRKEEIL
SLLKDTEHESGDDQDRNEKTPSLKWHKILWAIQDLDKKWLLLQKRKNALKSYYKKRNDEE
ACRIYDETRLSLNKQLFDSVMKSLKAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPK
RKSLYSICSKAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMF
ETPQAVLKGARHMAAIEISCEPCVRKHVRSYYMDYAVISTSPTSDGNVTIDSFHQFSAVK
WLREKPLSRFEDAQWLLIQKAEEEKLLTVTLKLPEKHLNKLINDFNEYYLSDGVSKSAQL
WNEQRKLILQDALSGFLLPSMEKEARTLMTSKAKNWLLMEYGKNLWNKVSVGPYQHKEND
ISSDEEAAPRVMACCWGPGKPATTFVMLDSAGEVLDVLYTGSLTIRSQNVNDQQRKKNDQ
ERVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDE
SLPRLYENSRISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLEN
FLTPDDKYGMIEQVMVNVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRA
GSIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDNTRIHPESYALAQE
LAKDVFDEDVKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYSKSKNREDKRDTFLDIKR
ELMQGFQDWRKQYEEPSQDEEFYMISGETEDTLAEGKIVQATVRKVQGQRAICGLESGLT
GMLMKEDYADDSRDISDLSDRLHEGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQVTR
NLDPYYHEDRSSLQSEQDKSRKEKELAKKLFKPRMIVHPRFQNITADEAMELLSDKDPGE
SIVRPSSRGPSFLTLTLKIYNGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLD
EVMDRYVDPLVAHLKTMLSYRKFRKGTKAEVDELMKIEKSEYPMRIVYGFGISHEHPGTF
ILTYIRSTNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAM
VPMRSPATGGSSAASAGSPWGGSSHDGGWRSQSYDRDRSSTPGSRTGRNDNRNSGSRDGH
PSGLPRPYGGRGRGSYNNNRGNNERPDSSYDSSRWDSSSKDGDDGLSNFPGAKIQNSPGK
EAFPGGWSSGGSGGGGGNGLSDSGGGGWGGNSGNSKGNWGGGGSGPSNSGGWGS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggcggtgatctccgatgaagaagatgaggtcgaattggacgaccgagagccg
cttgacggtgatgatgtcgacggtcgtaatatggaggacgaggaagacgaagaagatgaa
gaaggacaggatgagtatgaaaaggatggtttcatagtcgatgatatcgaagaagaagat
gaagaagatgtagagcagagggaagacagtgatgatgaaaggcagaagaagaagaaaagg
aagaaaaaggaggaatatgtacttgatgaagatgactatgaactccttgaggacaacaat
attagcattcaacggccgaaggggagcaaaaagtttaagaggcttaaaaaagctcgaagg
gacaatgtcgagccttctgggttttctgatgatgaggattttgtcgaaagtagtagaggc
ggacgaactgcagaggaaaaacttaaacgtagtttgtttggtgatgatgaagctccactt
gaggatattgccgaagaggaggaacaacctgaagaggaagaagatgctgatataggagat
gaggatgaaatggctgatttcattgtggatgaagaagttgatgaagatggggctccctta
aggcggaggaagttgaagaaaaagaaatccagacaagcgcctggtgtttcatcaactgct
ttgcaggaggcacatgaaatttttggtgatgttgatgagcttcttcagcttcgcaaaaga
gaattggatactcatgagtggcgtgaaaagagattagaagatgaatttgaaccaattgta
atttctgagaagtatatgacagaaaaagatgaccagataagggagattgatatgcctgaa
agaatgcagatttcagaggaaagcactgggcctcctcctactatggacgagaggctggag
gatgaggaggcttcgtggatacatggtcatattgctaatggaatgaactctttatttggc
aatgccagtggacaagacctatctgtaacaaagggtgatattctgcggtttctggatctt
gtacatgtccagaaattagatataccattcattgccatgtataggaaggaggaaatccta
agcttattaaaagatacagaacatgaatctggtgatgatcaggatagaaatgaaaaaaca
ccctcgttaaagtggcataagatactttgggcaattcaggacttggacaaaaagtggctg
cttcttcaaaagcgaaaaaatgctcttaaatcatactacaagaagcgtaatgacgaggag
gcatgtaggatttatgatgaaactagactgtcattgaataaacagctttttgattcggtc
atgaaatctctcaaggcagctgaatcagagagagaggtagatgatgttgactcaaagttc
aatttgcattttccccctggtgaagttggtgttgatgaaggacagttcaaaaggcctaag
aggaaatcactatacagtatatgtagtaaggctggcttatgggaggttgcaggaaaattt
ggttatagctctgagcaattcgggttgcagctctccttagaaaagatgaggaatgatgag
ttggaggatccaaaggaaacacctgaagagatggcatcaaactttacctgtgcgatgttt
gagactcctcaagctgttctcaagggagctaggcatatggcagctattgagattagttgt
gaaccttgtgtgaggaagcatgtcaggagctactatatggactatgccgtgatatcaaca
agtcctacatcagatggaaatgttacaatagattcttttcatcaattttcagctgttaag
tggctccgtgaaaagccactgagtagatttgaggatgcacagtggcttcttattcagaag
gctgaagaagaaaaacttctgactgttactctcaagctacccgaaaaacatttaaataag
ttgataaatgattttaatgaatattatctgagtgatggtgttagcaaatctgctcagctg
tggaatgagcagagaaagttgatattgcaggatgcactttctggttttcttctgccttca
atggagaaagaggcaagaaccctgatgactagtaaagcaaaaaactggttacttatggaa
tatggaaagaatttatggaataaagtatctgttggtccatatcaacacaaagaaaatgat
attagttctgatgaagaggctgccccaagggtaatggcatgctgttggggtcctggaaag
ccagctaccacctttgtgatgttagattcagctggtgaggttcttgatgttctttacact
ggatctctcaccatacgttctcaaaatgtgaatgatcaacagcggaagaaaaatgatcaa
gagcgagttttgaagttcatgacagaccatcaaccacatgttgttgttctaggagcagtt
aatttatcttgtacccgattgaaagatgatatttatgagattatttttaagatggtggag
gagaaccctagagacgttggacatgagatggatggattaagcattgtatatggtgatgag
tcccttcctcgtctgtatgaaaattctaggatttcctctgatcaattacaagggcaatca
ggcattgtgaagcgtgctgttgctcttggacgctatctgcaaaatcctctcgctatggtt
gcaacactttgtggtccaggaagggagatcttatcttggaaactacatcctttggagaac
ttcctgaccccagatgacaaatacggaatgattgaacaggttatggttaatgtaaccaac
caggttggcctggacactaatttggctataagccatgaatggttgttcagcccattgcaa
tttatagctggacttggacctaggaaggcagcttctttgcagagatccttggtgagggct
ggatcaattttcacacggaaggactttgttacagcacatggtcttggtaaaaaggtattt
gttaatgcagttgggttcttgcgtgtaaggcggagtggattggctgcaagcagcagccaa
tttatagatttattggataatacgagaattcatcctgaatcttatgctttagcgcaagaa
ttagcaaaagatgtttttgatgaagatgttaaaggtgatgctaatgatgatgaggatgca
gagatggccatagagcatgttagagaccggcctcatttactgaggactcttgatgttgat
gaatattctaagagcaagaatcgggaagataaacgagatacttttcttgacataaaaaga
gaactgatgcagggctttcaggattggcgtaagcaatatgaagagcccagtcaggatgaa
gagttttacatgatatctggtgaaacagaagatacccttgcggaagggaaaattgtgcaa
gctacagtccgcaaagtacaaggtcaaagagcaatttgtggacttgaatctggattgact
ggaatgcttatgaaagaagattatgcagatgattctagagatatttctgacttgtctgat
aggttacacgagggggatattgttacttgcaagattaaatcaattcagaagaataggtat
caagttttccttgtttgtaaagagagtgagatgagaagtaatcggcaccaggttactcga
aatcttgatccctactatcatgaagatcgaagcagcctacagagtgagcaagacaagtct
cgaaaagagaaggaacttgcgaaaaagcttttcaagccaagaatgattgttcaccctcgt
ttccagaatataacagcagatgaagcaatggagctcttatctgacaaggatcctggtgaa
agtattgtgcgaccaagttctcgaggaccttcttttttgactttgacacttaaaatttac
aatggagtatatgctcacaaagatatagttgaaggtggaaaggagcataaagacataact
agcttgttgcgtattgggaagaccttgaaaattggggaggacacgttcgaggatttggac
gaggtgatggatcgctatgttgatcccttagttgctcacttaaagacgatgctaagttat
cgcaagttcaggaagggcacaaaagcagaagttgacgaacttatgaagattgagaagtca
gagtatccaatgagaatagtctatggttttggaatttctcacgaacatccgggtacattc
attttgacatacatacgaagtacaaatccacaccacgagtatattggcctgtatccgaag
ggatttaaatttaggaaaagaatgtttgaagatattgataggcttgtggcctattttcaa
agacacattgatgatccccagcatgattcagcaccatcgattagatcagttgctgctatg
gtaccaatgcggagccctgcaactggtggctcttccgcagcatctgcaggtagcccttgg
ggtggttcatcgcatgatggtggctggaggagccagtcatatgacagggatcgttcttct
actcctgggtctagaacagggcgaaatgacaacagaaattctggtagtcgtgatggacat
cctagtggtctgcctagaccatacggtgggcgtggtcgaggctcatacaataacaataga
gggaacaatgagaggccagattctagttacgattcctccaggtgggattcatcttccaag
gatggggatgatggattgagcaacttcccaggagccaaaattcaaaattcaccaggcaaa
gaagcctttcccggtggctggagctctggtgggagtgggggtggtggtggtaatggatta
agcgacagtggcggtggtggttggggtgggaatagtgggaattccaaagggaattggggt
ggtggtggttctggtccaagtaacagtgggggatggggttcttaa
DBGET
integrated database retrieval system
