Cucurbita maxima (winter squash): 111465339
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Entry
111465339 CDS
T05246
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmax03000
]
111465339
03036 Chromosome and associated proteins [BR:
cmax03036
]
111465339
Transcription factors [BR:
cmax03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111465339
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111465339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Lyase_aromatic
N36
Motif
Other DBs
NCBI-GeneID:
111465339
NCBI-ProteinID:
XP_022965424
UniProt:
A0A6J1HQY8
LinkDB
All DBs
Position
Unknown
AA seq
1484 aa
AA seq
DB search
MTEKHEDVEDVGSVSTDSFIDDSEDDGPSTSGQDEQLHLEESLTEQEIEDLMAEFLEVES
KAAEAQEALEKESLSKVENEVREELALTLNGDDLETAVANEMAILVEEWEGVLDELEIES
AQLLEQLDGAGVELPSLFKQIESQASYGCYTEAWKKRIHWVGSQVTGDLLASVSDAEKTL
QTQRPVRRCRRHGKLLEEGASGYLQKKFSTHEMEGNGSENLEVDWCSLNKVFSEGSNNNE
TLFGSKNWASIYLASTPQQAAEMGLKFPGVDEVEEIDDVDGNSSDPFVAAAIANEKELDL
SEEQKRNFRKVKEEDDAIFDRKLQMHLKQKRYQKRCKQEVFQKDVSTVDKVIQRDEEQLV
SPVDCLNPVLDEKTEGNRKGLSDDENADGASSDIDMEGSLEKTASLHPSALSDFVEPLGS
KRLNDTEELIIQTKKSRTNGVHEDGSPLIKEDSAFNPTTLDTLCNTKQNDHGADSLPSEC
LNEKIRCTACDQMVIKAHAHPFLNVIVCEDCKCLMDDKKNVKEPDCSECYCGWCGRNADL
VSCKSCKTLFCISCIRRNLGVECLLKAQSSGWHCCCCRPSLLQSLTMQLEEVLGSGDLTG
SSSDSDSDNPHADINATISSKRRRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLKV
QFSSDSKRMSSAGFCGNLPEGASAEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKSH
QVSGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRTA
VIVTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYSA
FRNLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIAL
TGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLEDVKIMNQRSHI
LYEQLKGFVQRMDMSVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNGKDSSELL
RKRSFFAGYQALAQIWNHPGILQLTKEDKYSVKREDAVENFLADESSSDENIDSNIGIGE
KPANANGNHQDKYAGGFFVKDWWSGLLHASSYKELDYSGKMVLLVEILTMCSELGDKALV
FSQSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGRTESSERQRIVERFNESLNKR
VKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHG
TMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDDENPEGATELDLGNGHE
SHQTMTGNHGNVLKQKGPLSHGSCSSDKLMETLLGKHHPRWVANYHEHEKLLQENEEEKL
SKEEQDMAWEVYRKSLEWEEVQKVSPGDITAEQKLTTSIVAGPAPETIDLAQSRARNRFI
TRKCTNLSHLLTLRSQGTKVGCSTICGECAQEISWEELNKDSKK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaagcacgaagacgttgaagatgtaggcagtgtgtctaccgattcttttatc
gatgactctgaagatgatgggccatctacatctgggcaggacgagcaattgcatctcgag
gaatctttgacagagcaagagatagaggatttgatggctgagtttttggaagttgagagt
aaggccgcagaggctcaagaagcacttgaaaaggagtctctttccaaagtggagaatgaa
gttcgagaagaattggcattgactcttaatggtgatgatcttgaaactgcggttgcaaat
gaaatggctattttggtagaagagtgggaaggtgtgcttgatgaacttgagattgagagt
gctcagttattggagcaacttgatggtgctggcgtcgagttaccgagtctcttcaaacaa
attgaaagtcaggcttcttatggttgctatactgaagcttggaaaaagaggatacactgg
gtagggtctcaagtaactggcgatcttcttgcatcagtatctgacgcagagaagaccctt
caaacccaaaggcctgtaaggaggtgtagacgacatggtaaacttttggaggagggcgca
agtggatatctgcagaagaaattctccactcacgagatggagggaaatggatcagaaaat
ttggaagttgattggtgctctcttaataaagttttttcagaaggctcaaataacaatgaa
acattattcggcagcaagaattgggcttctatttacttggccagcactcctcagcaggct
gcagaaatgggactaaaatttcctggagttgatgaggtagaggaaatagatgatgttgat
ggaaattctagtgatccgtttgttgctgctgccattgcaaatgaaaaagagttggatctt
tctgaagaacaaaagagaaatttcagaaaggtcaaagaagaagatgatgccatttttgat
agaaaactccaaatgcatttgaaacaaaagcgatatcagaagagatgtaaacaggaggtc
tttcaaaaagatgtttccactgttgataaagtgatacaaagagatgaagagcagcttgta
tctccggttgactgtttgaaccctgttttagatgagaaaactgaaggaaatcgaaagggt
ctctcggatgatgaaaatgcagatggtgcttcaagtgatattgacatggaagggtctttg
gagaaaactgcttctttgcatccttcagcgttatctgattttgtggaacctttaggttca
aagcgtttaaacgatactgaagaactgattattcaaactaaaaagagtcgtaccaatggt
gtacatgaggatggaagtcccctgataaaggaggattctgctttcaatccaacaacgttg
gataccctatgcaacaccaaacaaaatgaccatggtgctgattctcttccatcagagtgc
ctgaatgagaagatccgttgtactgcgtgtgatcaaatggttattaaagcgcatgcacac
ccttttctgaacgtaattgtttgtgaggattgcaaatgtttgatggatgacaagaagaat
gtaaaggaacctgattgctctgagtgctattgtggatggtgtgggcgaaatgctgactta
gtaagttgtaaatcatgcaagacactattttgtatcagttgcataaggaggaacctcggt
gtcgagtgcttgcttaaggcccaatcttctggctggcattgttgttgttgtcgcccaagt
ctcttgcaatccttgaccatgcagttggaggaggtcttaggatctggagacttgaccggt
tctagctctgacagcgattcagacaacccacatgcagatattaatgcaaccataagctca
aagagaaggcgtaagaaaaagatccggcggatacttgatgatgctgaattaggagaagat
actaaaaagaaaattgccatagaaaaggaacgccaagaacgtctaaaatcactaaaagtt
cagttttcctctgattctaaaagaatgagctctgctggcttttgtggtaatctacctgaa
ggtgctagtgctgaagtccttggtgatgcttcaacgggatatatagtcaatgttgtaagg
gagaagggggaagaagcgattagaattccacccagcatttcatccaagttgaaaagccat
caggtttctggaataagatttatgtgggaaaatatcattcaatcagtaaggaaagtgaag
tctggtgataaaggtcttggatgcattcttgctcacacaatgggccttggtaaaactttt
caggttatagcattcttgtacactgcaatgaggaatgtggacttgggtttacgaactgca
gttatagtcacccctgttaatgtgttgcataattggcggcaagaattctttaggtggaaa
ccttcagaattaaagcctcttcgtgttttcatgcttgaagatgtgccaagggagaggagg
gcagagttgcttgctaagtggagagctaagggtggtgtctttttaattggttatagtgct
ttccgaaatttatctcttggtaaacatgtcaaagaccggcacatggccaaagaaatttgt
catgccttgcaggatggacctgatattcttgtatgtgacgaggcccacatgattaagaat
accaaggctgatgtaacccaggcattgaaacaagtgaaatgccagaggaggattgcatta
actggatcaccactacagaacaatctcatggagtattattgtatggttgattttgtgaga
gaaggtttcctgggaagtagccatgaatttcggaatcgcttccagaaccctatagagaat
gggcagcatactaattcaactctggaagatgttaaaataatgaaccagaggtctcatatc
ctatatgaacagttgaaagggtttgtacaaaggatggacatgtctgtggtgaagaaggac
ttgccgcctaaaacggtctttgtgatatccgttaaactttctcccttacagaggaagttg
tacaaaagatttcttgacgtgcatggttttaataatggcaaagattctagtgaactgttg
aggaagaggagtttttttgctggataccaagcacttgctcagatttggaatcatcctgga
atcctccaattgacaaaagaagacaaatattccgtgaagcgtgaagatgctgttgaaaat
tttcttgcagatgaaagctcgagtgacgaaaacatagattctaatatcggcattggagag
aagccagctaatgccaatgggaatcatcaggataaatatgctggtggctttttcgttaag
gattggtggagtggtctgcttcacgcaagtagttacaaggagctggattacagtggaaaa
atggttttgctagtagagatcttaactatgtgctctgaattgggggataaggcgttagta
ttcagccagagcattcctacgcttgacctaattgaattctatctttcaagattgcccaga
cgagggaagagaggaaaattctggaagaagggtaaagattggtataggctagatggaaga
acagagagttctgaaagacagaggattgttgagaggtttaatgagtctctaaataagagg
gtaaaatgtaccctgatatcaactagagctggatcattgggtatcaaccttcattctgct
aaccgcgtcatcatagtcgatggctcttggaatccaacttatgatcttcaggctatttat
cgagcttggagatatggccaaacgaaacccgtgtttgcttaccgatttttggcacatgga
acaatggaagaaaaaatttacaagcgccaggtaacaaaggagggactggctgcaagagtt
gttgatcgccaacaggtataccgaacaatttctcgggaagaaatgttgcatctttttgaa
tttggtgatgatgagaatcctgagggtgccactgagttggacctaggaaatggacatgaa
tctcaccagactatgactgggaatcacggcaatgtgctgaagcagaaagggcctctttca
catggaagttgctcatctgataagttgatggaaactttacttggcaaacaccatccaagg
tgggttgccaattaccatgagcacgaaaaactactccaagaaaatgaagaggaaaaacta
tctaaggaggagcaagacatggcatgggaagtgtacagaaaatcattagaatgggaggaa
gtccaaaaagtttcaccaggcgacattacagccgagcaaaagctaaccacatcgatcgtc
gcaggtccagcacctgagaccatcgatctggcacaatctagggcaaggaaccgattcatt
actcgtaaatgcactaatctttctcacttgctgacactcagaagccagggaacaaaggtt
ggttgtagtacaatatgtggggaatgtgcacaagagataagctgggaagagctcaacaaa
gatagcaagaagtga
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