Cucurbita maxima (winter squash): 111465348
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Entry
111465348 CDS
T05246
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111465348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111465348
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
111465348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
111465348
NCBI-ProteinID:
XP_022965443
UniProt:
A0A6J1HNY2
LinkDB
All DBs
Position
Unknown
AA seq
217 aa
AA seq
DB search
MGDDGRMHAMEDDESAAADQIRAIDIYPLSNYYFGSKEPLIFKDKTLADRVIRMKSNYAA
YGLRTSVEAVLLVELFKHPHVLLLQIRNSIFSLPGGRLRPNESDIDGLKRKLSRKLSANG
SPDASDWEVGDCLGTWWRPDFETLLNPYLSNNVKGAKECTKLFLVKLPESRKFIVPKNLK
LIAVPLCQLHENHKMYGPVISGIPQLLSKFSFNIIET
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgacggacgtatgcatgctatggaggatgatgaatctgccgctgccgaccaa
atccgcgccatcgatatttaccctctcagtaactactacttcggatccaaagagcctctt
attttcaaggacaagaccttggctgatcgcgttatcaggatgaaatccaattatgctgct
tatggattgaggacttctgtcgaagcagttttgctggttgagctatttaagcatcctcat
gtgttgctgttgcaaatacgaaattcaattttcagtcttcccggtggtcgcctaaggccc
aatgaatctgatattgatggcttgaaacgaaagttatcaaggaagctttctgccaatgga
tcccctgatgcatctgattgggaggtgggcgattgcctcggtacgtggtggaggcctgac
ttcgaaaccttgctcaatccatatttgtccaacaatgtaaaaggagccaaggagtgcaca
aaacttttcctggtcaaattgccggagagtcgaaaattcattgtgccaaagaacctcaag
ttgattgcagttcctttatgccaacttcacgaaaaccataagatgtacgggccagttata
tcgggtattccccagttactttccaagttttccttcaacatcatcgaaacttaa
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integrated database retrieval system
