Cucurbita maxima (winter squash): 111465890
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Entry
111465890 CDS
T05246
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial-like
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmax03016
]
111465890
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
111465890
Transfer RNA biogenesis [BR:
cmax03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
111465890
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
111465890
NCBI-ProteinID:
XP_022966104
UniProt:
A0A6J1HNG0
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All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MALRAANSCSVFRSASSPPLSAFRTCLFNARSSKLKYRYPVLCHKQQRFRSGGQRFYSLY
SIVENVVEELEALRRRKRVSATAKMGLVGMGSGELTEDKLMNQTLEKGRLLEFKKDSERV
LLAVAQRPDGKKNWMVFDQNGVTSSIKPQQVTYIVPGVENFDQTEIADFIKRAQNNLDPT
LLEFAWLELLEQNKAVTTEELAEMIFGNPEPLDSYCAHLLLSRDELYFTVLQTKGSRSFY
GPRPTDQVEELQRTKLAREAAENELQKFVELLKSAKAMPLKAKPPKSSWVTEEKTRHKIE
SLESYAIDACNDAEQRMTAGMILKAMGLVKTASSAVNLLIDIGYFPWHVNLELLKLNIRT
DHSDEIIAAAESLLLEASDADEVNRKNLTHLKVYAIDVDEADELDDALSATRLSDGRIKI
WIHVADPARFVRPGSIVDREAMKRGTSIFLPTATYPMFPEKLAMEGMSLKQGETCTAVTV
SVVLHSDGSIAEYSVENSIIKPTYMLTYESASELLSLNLEEEAELKTLSEAATLRLAWRR
QQGAIDMASLETRIKVANPQDLDPEINLYVENQADPAMRLVSEMMILCGEVIATFGYHHN
IPLPYRGQPQTNVDTSAFAHLQEGPVRSSAIVRTMRAAEIDFRKPIRHGTLGIPGYVQFT
SPIRRYMDLLAHYQVKAFLRGDSPPYSHGQLEGMASTVNINTKLAKKLSSTSLRYWVLEY
LRRKPKENRYRALILRFIKDRIAALLLVEVGFQASAWVSVGAQIGDEVQVRVEEAHPRDD
VLSLKEIIH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcgagctgctaacagttgctcggttttccgctctgcttcgtccccgcctctc
tctgccttccgaacatgcctcttcaatgccaggagctcgaaattgaagtataggtatcct
gtattatgccacaaacaacaacgttttaggagtggcggacagcgattctactccttgtac
agtatagtcgaaaacgttgttgaagagctcgaagctctgcgcaggcgaaagagagtttct
gctaccgctaaaatgggattggtgggcatgggcagtggagagcttaccgaagataagctt
atgaaccagacattggaaaagggacggttactggagttcaagaaggactcggagagggta
ctactggcagttgctcagagacctgatgggaaaaaaaactggatggtgttcgatcagaat
ggtgtgacctcatccattaagccacagcaagttacatacattgttccaggtgttgaaaat
tttgaccagacagaaattgcagacttcattaagagagctcagaataacttggatccaacg
ctgctggagttcgcttggcttgagcttcttgaacaaaataaggcagtgactaccgaagaa
ctagctgagatgatatttgggaatccagaacctcttgatagctattgtgcgcatctgttg
ttatcaagagatgagttatacttcactgttctgcagacaaaaggttcgcgatctttttat
ggtccaagacccactgatcaagttgaagaacttcaacgtactaagcttgcaagggaggcc
gctgaaaatgagctacaaaagtttgtagaattgctgaaatctgctaaggcgatgcctttg
aaggctaaacctcctaaatcttcctgggtaactgaagagaaaaccagacacaagattgag
tctctcgaatcttatgctattgatgcttgcaatgatgctgaacaaaggatgacagctggg
atgattctcaaggccatgggactggtgaaaacagcatcatcagcggttaatcttctcata
gacataggatatttcccttggcatgttaatcttgaacttctgaagttaaacattcggaca
gatcattcagatgaaattatagcagcagctgaatcacttttactcgaggcatctgatgct
gatgaggttaacaggaagaatctcacacatttgaaggtttatgccattgatgttgatgaa
gcagatgagcttgatgatgccttgagtgcaacaagattgtcagatggccgaattaaaata
tggattcatgttgccgatccagctagatttgttcgaccagggagcatagtagacagggag
gccatgaaaagaggcacttctatatttcttccaacagccacataccctatgtttcctgaa
aaactagcaatggagggaatgagtttaaaacagggagagacttgcactgcagttactgta
tctgttgtccttcattctgatggaagcattgcagaatactccgtggaaaactcaatcatc
aaaccaacgtacatgctgacatatgaaagtgcttctgagctgcttagtttgaacttggaa
gaggaggcagaacttaaaactctatctgaagctgcaactttgcgattagcatggcgaagg
caacagggggcaattgacatggcctctttggagacacggatcaaggtagcaaatccacaa
gacctggatcctgaaatcaatctctatgtggagaaccaagctgatcctgccatgcgactt
gtttctgagatgatgattctatgtggagaagttatagcaacttttggatatcaccataac
attccgttgccctatagaggacaaccccaaacaaatgtagatacatctgcatttgcacat
cttcaagaaggacctgttaggagctctgcaattgttagaacaatgcgtgctgctgaaata
gatttcaggaagccgatacgccatgggactttgggaattcctggttatgtccaatttaca
tctcccatccgtagatatatggatcttcttgcacattatcaggtaaaggcattccttagg
ggtgactctcctccgtattcccatggtcaattagaaggaatggcatcaactgtgaatata
aatactaaattggcaaagaagctctcaagcaccagtcttcgttattgggtattagagtac
ttgagaaggaaaccaaaagaaaatagatatcgggcattgattcttaggttcattaaagat
cgaattgcagccctgctgctggtcgaggtgggattccaagcatctgcgtgggtatctgtt
ggagcacaaattggagatgaagtgcaagttcgagtggaggaagcccatccacgtgatgat
gttctttctctgaaggagattattcactag
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