Cucurbita maxima (winter squash): 111465918 Help Entry 111465918         CDS       T05246                                  Name (RefSeq) protein RRP6-like 2   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism cmax  Cucurbita maxima (winter squash) Pathway cmax03018   RNA degradation Brite KEGG Orthology (KO) [BR:cmax00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     111465918  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmax03019]     111465918 Messenger RNA biogenesis [BR:cmax03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      111465918 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 HRDC PMC2NT Motif Other DBs NCBI-GeneID:  111465918 NCBI-ProteinID:  XP_022966154 UniProt:  A0A6J1HSV6 LinkDB All DBs Position Unknown AA seq 956 aa AA seqDB search MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSRGIPADKDFHFYYSFDEFKIPIQSIER QSQSMLETIGSSAEVWGKEMAFPEDTDDAYDWLVNVNDEIFERFDLSLDEFQRIRKEEEE SGRAVALMADSNDGFQLVCGKKKKTPSHGDEVHDSSFESSVKVATKDRKTLGVKPKVPFH IPTIRRPQDEFNILVNNSNQPFEHVWLERSEDGSRFAHPLEKLSVLDFVDKINADFQPVY PPSLDCTPFKFIEEVNDLKELAAKLQGVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV VDTLKLRIHVGPYLREVFKDPSKKKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL ERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRMKLSSM PRESEESDFPLVEVYKRSCDVCLHLYEKELLTENSYLYVYGLQGSGFNAQQLAVAAGLFE WRDAVAREEDESTGYILPNKTLLDIAKQMPVTINKLRRLLKSKHPFLERNLASIVTIIRH SMLNSCAFEVAAERLKEACAEAASEEQASTSEHQDMNISDISNLRHVIPFTKVNAVENTA NGPIFSPSSQSKVAPLEHGYRPFVPGKFLKVDHSLHPVLNGSRQVSQVGPTTSEPSKHSN GDKYPVAQVTGMNISLQKKGNRGGLGSLLGNSAPKRKLDTDQKDNEENKLDKIRSSVCLP FHSFSGTSEPSKSVKEPTTMTLLKTQNSEAPAAESTKSSNIEPPVMPVPKPSPEEVILLE DDSDEEFEDEEPHPVAENTNEPKLKGFSASSPLEIDGDENDDEDEPMSLSELSSSFQKCL NSNEQAMNLGKTDNPGKQSAFLQIKPFDYDAARKQVVFGEDMAENSEPEDDKAVKPSKNA GASKGLKPSKNAAGAKLDLGLDKVEKNSGAAAAVELPQGKRRHAFPATGNRSATFR NT seq 2871 nt NT seq  +upstreamnt  +downstreamnt atggatgttgatcagtctgattcacagaaggctcagaccttacaatccctaaccagtggt tctctcggttcgtctctgtccaagctcgccggctcttcccggggtattccggccgacaaa gactttcacttttattacagcttcgacgaattcaaaatcccgatacagagcatcgagcgg caatctcagtcgatgctcgagaccattggctcgtccgccgaagtttggggcaaggaaatg gcgttccctgaggataccgacgacgcgtatgattggttagttaatgttaatgatgaaatt tttgagcggtttgatctgtctctggatgagtttcagaggattcggaaggaggaggaggag agtgggagggctgtggctttaatggcggactctaacgatgggtttcagttggtgtgtggg aagaagaagaaaactccgagtcatggagacgaggtgcatgattcgagttttgagtcgagt gtgaaggttgctaccaaggataggaaaactttgggggtgaagccgaaagttccatttcat ataccgactatccgtagaccgcaggatgagtttaatattttggttaataattcaaatcag cctttcgagcatgtctggttggaaaggagtgaagatggctcgcggtttgcacatccactg gagaagctctctgtattggactttgtcgataagattaatgcagattttcaacctgtttat ccaccatctttggattgtactcccttcaaattcatagaggaagtcaatgatttgaaagaa ctggctgctaaattgcaaggagttaatgaatttgcggttgatttggaacataaccagtat cgatcttttcaaggacttacatgcctgatgcaaatttctacaagaactgaggattttgtt gtagatacgctgaagctcagaattcatgtggggccctacctaagagaggttttcaaggat ccttcaaagaaaaaggtgctgcatggagcagatcgagacattgtgtggcttcaacgggat ttcgggatttatatttgcaacttgtttgacactgggcaggcttcaagagtattgaaactg gaaagaaatagtctggagtatctccttcatcacttttgtggtgttgcagctaataaagag taccagaatgcagattggagattaagacctctccctgaggagatgctgagatatgcgagg gaagatacacattatttgctgtatatttatgatttgatgaggatgaaactgtcctcaatg ccccgtgaatctgaagaatctgattttcctctggtagaggtttacaagcggagttgtgac gtatgcctgcatctttacgagaaggagctgttgactgaaaactcatatctttatgtgtac ggattgcagggttctggcttcaatgcacaacaacttgctgttgctgcaggtctctttgag tggcgagatgctgttgcccgtgaagaggatgaaagtaccggttacatattgccgaacaaa acgcttcttgacattgccaagcagatgcctgtcacaattaacaaattacgtagactactg aaatcaaagcacccatttcttgagcgcaatcttgcttcaattgttaccatcattaggcat tcgatgctgaattcttgtgcattcgaagtggctgctgagcgtttgaaggaagcctgtgca gaggcggcttcagaagaacaggcatccactagtgaacatcaagatatgaatatatccgat atttcaaatttgagacacgtaatcccgtttacgaaggtcaatgctgtggaaaatactgcc aatggtccaatcttttcaccttcttcccagtcaaaagttgctcccttggaacatggatac cggccctttgtacctggaaaatttttaaaggtagaccattctctgcatcctgttttgaat gggagtagacaggtttctcaagttggtccaacaacttcggagccgagcaaacactcgaat ggagataaatatccagtagcacaggttactggaatgaacatttcattgcaaaagaagggt aaccgaggtggtctcgggtcactattgggaaactcggccccaaagagaaaattagatacc gatcaaaaggataatgaagagaataagttggataaaattcgatcctctgtttgtctaccc tttcattcattctcgggaacgagtgaaccatcaaagtcagttaaagaaccaacgaccatg actctactaaaaactcaaaattcggaagcacctgctgctgagtcaacaaaaagttcgaat attgagcctcctgtgatgccagttccaaaaccttccccagaagaggttatattgttagaa gatgattcagatgaggagttcgaagatgaagaaccacatcctgttgcagaaaacaccaat gagccgaagttgaaaggttttagtgctagttcgcctcttgaaatcgatggcgacgaaaat gatgatgaagacgaaccaatgtccctgtctgaattgtcttctagctttcagaaatgtttg aattcaaatgaacaagctatgaaccttgggaaaactgataatccaggaaaacaaagtgcc tttttgcagatcaagccgttcgactatgatgcagctaggaaacaagtagtattcggagaa gatatggcagaaaactcggaaccagaagacgacaaagctgtaaagccatcaaagaatgct ggggccagcaaaggtttgaagccatcaaagaatgctgctggggccaagttagatttaggt ctagataaagttgaaaagaacagtggcgccgccgccgccgtggaattaccgcaaggcaaa cgacgccatgccttccctgcaactggaaaccgaagtgcaactttccgctaa

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