Cucurbita maxima (winter squash): 111466165
Help
Entry
111466165 CDS
T05246
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111466165
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
111466165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
111466165
NCBI-ProteinID:
XP_022966517
UniProt:
A0A6J1HN68
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MWTNIFKIGGLHQISWFQFLPNESDLISLPDKSAKVEHNDAATFLVLSSHVQLQKEGFLS
TWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVAETAQAAVSKLRVVASGLWTSPGD
LEEVAAALSQALRNCIERSLTALSYMRFGDVFTKYQYGQSEELFRRGQPTMEFIFSATEE
AIFVHAIISAKHIRALSNAEIERVLKHSTNNSCLGLPVIVSPHGIRGRFTGCCASDVVKQ
ICSSSGKSRTSCGFVGLPHHVSQGGCQSKGQNCYVEVTLGCSKSVSERPLQSNSNYIRNV
STSGDLKGLSNNLSFHKKTFIYPSEAVLVLLLQTSFARSSLKRFWLQNWIGPSLPGSSFY
MHCGGNVDYMEGLWTETDKIRSQHGYDSSSNSNSSSIGSISSSSSDSDCKTGASELEADA
DSLSCRQSGLSSNDQSANSGRKLGIKRSRSGMPDSLDQMGTGAQIQDAFKSEFTSTELNN
SAITGVSNMLIGSPWDWDDDDRGVDDIEDLLLHFGSFGDFFENDVLPFGEPPGAAESQSL
SFSAPDYADVGSSPGGVMDVSDQMLLPVGFPSFDSFNPAVTKTTDEVLSKDHEVTNNALS
SVTANQTPVSSSGEFDQITKYEALMTLAPEYGAVETPTSEFSSSIFRSPYIPKSREIESS
NLSTNSYIYGATPPSSPYFDWSDEKSGISSNSKPSNVLSAKNYYTHVDNVKEKHIRKSAA
CKNSISTSDGLASSLSNHNAVNAVKSAQRKMNEDTIEADCLFMSQKHVLAMEVECLMFQA
SMCRVRHSLQLSGSSTVSGTNQLSSDPSTITDYMANEVKKKDTIPMRIAGDVDGGTLDGH
HNAPVGVWRSVGVPKVPKPSNSPSMELGSSLPHNSFHEDGVLSYGQRPPLQELLDAMPLL
VQQATSFVDLALDADCGDGPYGWLGLQEQWRRGFPCGPSMVHAGCGGTLASCHALDIAGV
ELVDPLSADVYAPSVMSLLQSDMKTALKSAFGTLDGPLSVTDWCKGRGQLGDMGSTGDGL
SAESTINESKDSSSTVMLNIGEPISPSHSSASGSSSLKGSSTMDGSKMDETSQRRSNQEI
SSSGSDQQLLPSRLRPTIFVLPSPAILVGYQDDWLKTSANSLQLWEKAPLEPYAVQKPIN
YCVICPDIDPLASAAADFFQQLGTVYETCKLGTHTPHNLGNQMDVDSGKLLSSGFVLLDC
PQSMKIDSSSASIVGSISDYLLSLSNGWDLTSYLRSLSKALKALKLSPSMSANPKEGSNG
SCMVLYVICPFPDPLEVLQTVVESSVAVGSVTLQSDRDRRTILCSQVAKSLSCSAAVDES
STSNVLVLQGFTLPKLVLQIVTVDAIFRVSSPSVNEIVILKETAFTVYNKARRISRGTLT
DVVQSSSISSRSHSVLSSMSSSIPGMWKDCVGIRIAGHSLPREGEIDGTLRSGTWDNSWQ
TRPGSLSNDPNRIGEYYLQDDSCYMFEPLFIMAEPGSLDHGISPINPVTLGAKSSKPLSD
DNSGAFLPNVSSAVGMDIGTNSQVDGPEMDGFGGHQKNPSLHCCYGWTEDWRWLVCIWTD
SRGELLDSHIFPFGGISSRQDTKGLECIFVQVLQQGCMILQSCSPDTSVSKPRDLVIARI
GTFYELEYLEWQKAIYSLWGSEVKKWPLQLRRCMPDGISSSSNGSSLQQQEMSLIHDRNL
PSSPNPLYSPHSKSTGFMKASIGQPTIRKQLMGGHAVVDNSRGMIQWVHSISFVAISMEH
SLQLLLQADSPSPGGNQGGVQSSSYVEGFTPVKSLGSTSSSYILIPSPSLRFLPSNPLQL
PTCLTAESPPLAHLLHSKGSAIPLSTGFAISRAVPSMRKDSRSNMKEEWPSALSVSLIDY
YGHNVTQEKNVRGIIKQVGRSSSVESRDFEIETHLILESVIAELHALSWMTVSPAYLDRR
TALPFHCDMVLRLRRILHFADTELSRRAEKSKH
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaatattttcaaaattgggggtctacatcaaatttcatggttccagtttctg
cctaatgaatctgacttgatttcattaccggacaaaagtgcaaaggttgagcacaatgat
gctgccacattcttggtgctttcatcacacgtgcaattacagaaggaaggatttttaagc
acttggaccaactcatttgttgggccttgggacccttctcagggtttgcacaatcctgat
gaaaaaattaaactttggctttttctacctgggcgccattcttctgttgctgaaactgct
caagcagctgtttccaagttaagggtggttgcctctggactgtggacctctcctggggat
ttggaggaggttgcggctgccctttcacaggcattacgaaactgtattgagagatcccta
actgcactttcatacatgaggtttggagatgttttcacaaaatatcagtatggtcaaagt
gaagaattattcaggagagggcaacctacaatggagttcatattttctgctactgaggag
gcaatatttgtgcatgccatcatatctgcaaaacatattcgagcactatcaaatgcagaa
attgaaagagtgttgaagcattcaacaaataattcctgtcttggacttccagtgattgtt
tcacctcatggaatccggggtaggttcactggatgttgtgctagtgatgttgtgaaacaa
atatgttccagttctggaaagtctaggacttcgtgtggatttgtgggtttgccccatcac
gtttctcaaggtggctgccagtcaaaggggcaaaattgctatgttgaagttaccctaggg
tgctctaaatcagtgagtgagaggccgctgcaatccaattcaaattacataagaaacgta
tcaacatctggtgatctgaaaggattgtcaaacaatttatcttttcataaaaagactttt
atatatccatccgaggcagtgcttgttttgttattgcaaacttcatttgccaggtcgtcc
ttgaaaagattttggctgcaaaactggataggaccctcgttacctggttcttctttctac
atgcattgcggtggaaatgtagattatatggaaggtttgtggactgagactgataaaata
cgttcacagcatggttacgatagtagcagcaatagtaacagtagcagcattggtagcata
agtagtagttctagtgatagtgattgcaagacaggagccagcgaacttgaagcagatgct
gattccttatcttgcaggcagtctggattgtcttcaaatgaccagtcagcaaacagtggc
cgaaaattgggtattaagcggtctcgttcagggatgccagattcgttagatcaaatgggt
acaggtgctcaaattcaggatgctttcaaatccgagtttacatccaccgagctcaacaat
tccgctattacaggagttagtaatatgctaattggatctccttgggactgggatgatgat
gacaggggcgtggatgacattgaggatctccttttgcattttgggagcttcggagacttc
tttgagaatgatgttttaccatttggggagcccccaggagctgcagagtcacaatctctt
tcgttttcggctccagactatgctgatgtaggtagcagtccaggtggggtcatggatgtt
tctgatcagatgcttttgcctgtggggtttccctccttcgatagcttcaacccagctgtt
acaaaaacaacagatgaggttctaagcaaagatcatgaagtcacaaacaatgcattgtcc
tcagtaacagccaatcaaactccagtgtcttcttctggggagtttgatcaaattaccaag
tatgaagctctgatgacacttgctccagaatatggagcagttgaaacacctacaagtgag
ttttcttcatcaatattccgaagtccatatattcctaaatctcgggagatagagagttca
aacttaagcacaaacagctacatatatggtgcaacaccaccctcttcgccatactttgat
tggtcagatgaaaagagtggtatctcctcaaattcaaaaccatcaaatgttctaagtgca
aaaaactactatacacatgttgacaatgtgaaagagaaacatataagaaaatcagctgca
tgtaagaacagcatctctacatctgatgggctggcatcatctctctcaaatcacaatgct
gtaaatgcggtcaaatctgcacagaggaagatgaatgaggacactattgaagctgattgt
ttatttatgtctcagaagcatgttcttgcaatggaagttgaatgcttaatgttccaagct
tctatgtgcagagtacggcattccctgcagttgtctggtagttccaccgtttctggtaca
aatcagctgtcaagtgatccaagtactattacagattatatggcgaatgaggtgaagaag
aaagatactataccaatgagaatagccggagatgttgatgggggaacacttgatggacac
cacaatgcacctgttggtgtttggcggtctgttggagttcccaaggttccaaagccctca
aattcacctagtatggaacttggctcttccttaccccacaattctttccatgaagatgga
gttctctcttatgggcaaagaccaccacttcaggaactccttgatgccatgcctttactt
gtccagcaggctacttcttttgttgacctggccttggatgcagattgtggtgatggtccg
tatggctggctaggtttgcaggaacaatggaggaggggatttccatgtgggccatctatg
gttcatgcaggctgtggaggaaccttagcctcttgtcatgcattggacattgcaggcgtt
gagttagttgatcctctttctgctgatgtttatgccccgtctgtaatgagtttgctgcag
tccgacatgaaaacagccttgaaatctgcatttggcactttggatggtccgttatctgta
actgattggtgcaaaggtcgtggtcaattaggtgatatgggaagcacaggtgatggatta
tctgctgagtctactataaatgaatctaaagattcttcgagtactgttatgctaaacatt
ggagagcccataagcccctcacattcttctgctagtggatcgtctagtctcaaaggcagt
agcacaatggatgggtccaagatggatgagacttcccaaaggagatcaaaccaagaaatc
tccagttcaggatcagaccagcaactactaccttcccgactgagaccaacgatttttgtt
ctcccatcacccgcgatacttgttgggtaccaagatgattggcttaagacatctgccaac
tctctgcaactttgggaaaaggcccctcttgagccttatgctgtacaaaaacctataaat
tattgcgtcatttgcccagatattgatcctcttgcatctgctgccgccgattttttccag
caactaggaactgtgtatgagacatgcaagctgggaacacataccccacataatttaggg
aatcaaatggatgtagattctgggaagttgttatcttcaggtttcgtcctactcgattgt
ccccagtcgatgaaaattgatagcagtagtgcttcaattgtcggttcaattagtgactat
ttgctttctctatcaaatggatgggacttgacaagttatcttagatctctttcaaaagct
ttgaaagctttgaaactctctccatctatgtcagctaatcccaaagaaggcagtaatggt
tcctgcatggtactttatgtcatatgtccttttcctgatcctctggaagtattgcaaact
gtcgttgaatcttctgttgctgtcggttctgtcacgctccagtcagatagagataggagg
acaatattgtgtagtcaggttgcaaagtcattaagctgctcagcagctgttgacgagtca
tcgacgtcaaacgttctagttcttcaaggatttactcttcctaaattggtattgcagatt
gtgacagtggatgcaattttcagagtgagtagtccatcagtaaacgaaattgtaattctt
aaagaaacagctttcactgtttataacaaggctcgtcgaatatcacggggaacattgact
gatgtagtccagtcatcatcaatatccagtagatctcattcagttttatcatcaatgtca
tcttccattccagggatgtggaaagattgcgttggtattagaatagctgggcattcactc
cctcgagagggtgaaatcgatggtaccctgaggtctggaacctgggataattcatggcaa
acaaggcctggatcattaagtaatgacccaaatagaattggagaatattatcttcaagat
gattcttgctacatgtttgaaccactttttattatggcagaacctggttcacttgaccat
ggaatttcaccaataaatcctgttacactaggagcaaagtcttcgaaaccattatccgat
gacaacagcggtgcctttttaccgaatgtaagttcagcagtaggtatggatataggaact
aactctcaagtagatggacctgagatggacgggtttggaggtcatcaaaagaatcctagc
ctacactgttgctatggatggacagaagactggcgctggctagtatgcatctggacagat
tcacgaggagaattattagacagtcatatatttccctttggtgggatcagcagtaggcag
gatacgaagggtctggaatgcatttttgtccaagttctgcagcaaggctgtatgatactt
cagtcatgttctcctgatactagtgtttccaagcctagagatttggttattgcaagaatt
ggaacattctacgaactcgagtatctagagtggcagaaggccatttattcactatgggga
tctgaggtgaaaaaatggccgttgcaactgcgccgctgcatgccagatgggatatcatca
agtagtaatgggagttccttgcaacaacaggagatgagtttgattcacgatagaaacctt
ccttcctccccaaatcctttatatagcccgcattcaaaatctacaggctttatgaaagct
agcattggacaacctactataagaaagcagctaatgggtggtcatgcagtggtggacaac
tcaagaggaatgattcagtgggtgcatagtatcagttttgtcgcgatttcgatggagcat
tctctgcagctattactgcaagccgattcaccatcgcccggtggaaatcaaggtggtgta
cagtcatcgtcgtatgtagaaggctttactccggttaaatctcttggttccacatcttct
tcttacatactaatcccatcacctagcctgcgtttccttccctcgaaccctcttcagctt
cccacatgcctcaccgccgaatccccacctttggcgcatctcctccacagtaaggggtct
gcaattccactttccactggatttgccatttcaagagctgtaccctcaatgaggaaggat
tcccggagcaacatgaaagaggaatggccctcagccctttcggttagtctcatcgattac
tatgggcataacgtcacacaagaaaagaatgtccgagggattatcaagcaagtgggaaga
agttcaagtgtggaatcacgagactttgaaatcgagacgcatttgatcctcgagtctgtc
atagcagagcttcatgccttatcatggatgactgtgagcccagcatacttagaccgacga
actgccctgccgtttcactgtgatatggttttgagactcaggaggattcttcattttgct
gacacagagctttctaggcgcgctgaaaaatctaaacattag
DBGET
integrated database retrieval system
