Cucurbita maxima (winter squash): 111466521
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Entry
111466521 CDS
T05246
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111466521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111466521
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111466521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
111466521
NCBI-ProteinID:
XP_022966970
UniProt:
A0A6J1HT18
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MFGAQLSSSAFGTPQSTPGFGTPQSTPAFGTPQSTPAFGTPASTPAFGTPSASPAFGNFS
STPAFGTPSSSSFATGFGSSLFSTPFSSQPSQQQQQQSPLFQLPAATGFGFQTPFAAPQS
SLFPNAQLTTQMAPVAPLPFSMADRDIQAIVEAYKDDAGNPKYAFKRLLFSVTDPQYRAK
PAGVSDIMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVILSDAERLRMTQ
SNVKTLQRHFLADTLPWVQRLKQKEQGLQRRLLRMMRIVEALESKGCRVPIMTGEAELAE
KLALITRQLRGSGAELSRRVKNLLTITCGQANGSGAGNSIYLQGSTKIHEQSLVDMQEVL
QQQTEAIARLGTVLKRDVRDMEIIMAEDKEMIDDLS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagctcaactctcctcctccgccttcggcactccacaatcaactccgggcttc
ggcactccacaatcaactccagccttcggcactccacaatcaactccggcctttggcacg
ccggcgtccactccggccttcggaactccatcggcgtcccccgcatttggaaacttttca
tcaactcctgcttttggaactccatcttcgtcgtcttttgctaccggcttcggctcgtct
cttttctccactcctttctcttctcagccttcacaacagcagcagcagcaatcgccgttg
tttcagctaccagcagctacaggatttggtttccagactccgtttgcagcgcctcagtcc
agtctatttccaaatgctcaattgaccactcagatggccccggtggcaccgcttcctttc
tccatggcagatcgagatattcaagcaattgttgaggcttacaaggacgacgcaggaaac
cctaagtatgctttcaagcgtttgttgttcagtgtaactgatcctcaatatagggcgaaa
cctgctggtgtgtcggatataatgtgggctgaggctatggcaaaacttgaaggcatggaa
agtgctgatagagagcgattgtggccacagcttgttcaaggttttaaggatttatctcag
cgattgaagattcaagatgaagtcattctttctgatgctgagagactgcggatgacccaa
agcaatgtcaaaacgcttcagaggcattttctagctgatactctaccttgggtccaaaga
ttgaaacagaaggagcaaggtcttcaaaggcgtcttttgagaatgatgagaattgtggag
gcgctagaaagtaagggttgccgagtgcctataatgacaggggaggctgaattggctgag
aagttagctttgataacgagacagttgagaggatctggagcagagctttcgaggagggtg
aaaaatttgcttacaattacttgtggtcaagcaaatggctctggtgctggtaattctatc
tatcttcaaggttcgacaaaaatacacgaacagagtcttgttgatatgcaggaggtattg
cagcagcagaccgaggccattgctagacttggaactgttttaaagcgagatgttagagac
atggaaattataatggctgaagacaaagagatgatagatgatttgagttaa
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