Cucurbita maxima (winter squash): 111466807
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Entry
111466807 CDS
T05246
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111466807
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111466807
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111466807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
DUF7051
DUF4349
Motif
Other DBs
NCBI-GeneID:
111466807
NCBI-ProteinID:
XP_022967200
UniProt:
A0A6J1HTR5
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MNTEEVLEELLNVEVQINEVQAEINILLERQDNLYQRKSELQSLLELCKETEDSVSHTGT
STNSENWSGPFKWDSEANDVKLNIFGISTYRANQREIVNAVMSGRDVLVIMAAGGGKSLC
YQLPALLYDGLALVVSPLLSLIQDQVMGLAALGISASMLTSATSKEDEKSIYKNLEKGEG
NMKILYVTPEKISKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILK
TQFPNAPMIALTATATQRVRNDLVEMLRIPKYVKFVSTVNRPNLFYMVREKSSVSKVVID
QIAEFVQESYPNNESGIIYCFSRKECEQVAKELRVRGISADHYHADMDSVAREKVHMRWS
SSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYYRPG
DVPRQSSMVFYENSGLENLYGIVQYCQSRQQCRRSAFFRHFAEPLKDCNGMCDTCAVPNE
FTELDVCCHARVIISMLQDVQKTNQRMTMLQLVDKLKGKRDELVSDLRKEEMEQLIIQLL
LDRVLKEEFQHTAYATNAYITVGPLARQVLQGKKVVKLEISGKQKITGVKSRRKSVASSG
LEYRLDELRKELASIDGDIFPHAVLSTQQIGVLSAQKPTSLDQLETMIGKVKAEKYGNRI
LGEIEKWSAAQSQNASQEEQGDEDRAPKRPKTIDTHVVIESSDEEA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggaagaggtattagaggagcttctgaacgtagaagtgcagataaacgaagtc
caagctgaaataaatattcttctggaacgccaagacaatttgtaccaaagaaaatccgag
ctgcagtccttgttagaactctgtaaagaaacagaagattccgtcagccacacaggcact
tctacgaattcagaaaactggtctggtccatttaaatgggattccgaagcgaatgatgtt
aagttgaacatctttggcatatccacatatcgtgcaaaccagcgagagattgtcaatgct
gtcatgagtgggcgagatgttttggtgattatggctgctggaggtgggaagagtctttgt
taccagttaccagctcttctatatgatggacttgctctggttgtcagtcctttactttct
ttgattcaggatcaggttatgggtttggctgctttaggaatttcagcatctatgcttact
tcagctactagtaaagaagatgagaagtccatatacaagaatcttgaaaagggtgaaggg
aatatgaaaatattatatgtcacaccagaaaagatatcaaagagcaagagatttatgtct
aaacttgaaaagtgctatcatgctggtcgtctttctcttattgcaattgacgaggctcat
tgctgtagtcagtggggccatgactttcgacctgactacaagaatcttggtattctgaag
actcagtttccaaatgctcctatgattgctttgactgcaactgccactcaaagggtccga
aatgatctggttgagatgcttcgcatccccaaatatgttaaatttgtcagtacagtcaac
aggccgaatctcttttacatggtacgggaaaagtcgtcggttagcaaggtggtgattgat
caaatagctgaatttgtacaagaatcttatccaaacaatgaatcgggtataatatactgc
ttttcccgaaaggagtgtgagcaggttgcaaaggagttgcgtgtgaggggcatttctgct
gaccattatcatgcagacatggattctgttgcacgtgagaaagttcatatgcggtggagc
agttctaggttgcaggttattgttggcacggtagcctttggtatgggaatcaacaaacca
gatgtcagattcgtcatccatcacagtctgagcaaatcaatggaaacatactatcaggaa
agtggacgagctggacgggatgggcttccatccgaatgcctactttactataggcctggt
gatgtcccaagacaaagttcaatggtattttatgagaattctggattggagaatctatat
ggtattgttcaatattgtcagtccagacaacaatgtcgtcgcagtgccttcttccgacat
tttgctgagccattaaaagactgcaatgggatgtgcgatacgtgtgcagtccccaatgag
tttacggaattggatgtctgttgtcatgctagagttattatttcaatgttacaagatgta
cagaagaccaatcagaggatgacaatgttgcaattagttgacaaattgaaaggaaagcgc
gacgaactagtttctgacctaaggaaagaggagatggagcaacttatcatacaactttta
ttagaccgtgttttgaaagaagaatttcagcatacagcttatgctacaaatgcgtatatt
acagttggaccattagcccggcaagtgttgcaagggaagaaggttgtgaaacttgagatt
tccggcaaacaaaagataactggtgtaaaatctagaagaaagagtgttgcttcatcaggt
ttagagtatagactcgacgagctacgcaaggaacttgcgtccattgacggagacattttc
cctcatgcagtgctctctacccagcaaattggtgtcttaagtgcccaaaagcccacttcc
ttggatcagttggaaacaatgattggaaaagtgaaggcagagaagtatggaaatagaatt
cttggggaaatagaaaagtggtccgctgctcaaagccaaaatgcttcgcaagaagagcaa
ggagatgaagatagggctccaaaaagaccaaaaaccatcgacactcacgttgttattgag
agcagcgacgaggaagcctga
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