Cucurbita maxima (winter squash): 111466808
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Entry
111466808 CDS
T05246
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
cmax03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111466808
03083 Polycomb repressive complex
111466808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111466808
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111466808
Histone modification proteins
HAT complexes
HATB complex
111466808
HDAC complexes
Sin3A-HDAC complex
111466808
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111466808
PRC2.2
111466808
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111466808
Heterochromatin formation proteins
Other heterochromatin formation proteins
111466808
Chromatin remodeling factors
NuRD complex
111466808
NuRF complex
111466808
NuRF complex (fruit fly)
111466808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
DUF3798
Motif
Other DBs
NCBI-GeneID:
111466808
NCBI-ProteinID:
XP_022967203
UniProt:
A0A6J1HUE9
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MDSSQSQQQQQQQPQQQQPQLQQQPVVKKKETRGRKPKPKEEKKDEQQAKKMKAQQQPSV
DERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNT
LVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHT
DSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLV
VLWSIQDHITTAASDAAASKSPGSGGSIIKKAGEANDKTAEGPSIGPRGVYHGHEDTVED
VTFCPSNAQEFCSVGDDSCLILWDARTGTSPAVKVEKAHNADLHCVDWNPHDDNLIITGS
ADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYD
KVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTLVSVSDDCDTTGGGGTLQ
IWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctcagtcgcagcagcagcagcaacaacagcctcaacaacagcaaccgcaa
ctgcagcagcaacctgttgtgaagaagaaggagaccagaggccgcaagccgaagcccaag
gaggagaagaaggacgagcagcaagctaagaagatgaaggctcagcaacaaccctctgtc
gacgagcgctacactcagtggaagtctcttgttcctgttctttacgactggttcgccaac
cacaatcttgtttggccttctctctcttgccggtggggtcctcagctcgagcaagcgacg
tataagaatcgacagcgactttatctatctgaacagactgatggtagtgttccgaataca
ctggtcattgcaaattgtgaagttgtgaagcccagggttgcagctgcggagcacatttct
cagttcaatgaagaagcacgctctccatttgtaaagaagtacaagactatcatacaccct
ggtgaggttaacagaattagggaacttccccagaatgctagaattgttgccacacacact
gatagtccagatgttctcatttgggatgttgaggcacaacctaatcgtcatgctgtcctt
ggtgccacaaattctcgcccagatttgattcttactggtcatcaagaaaatgctgagttt
gctctagcaatgtgccccactgaaccttatgttctctctggaggaaaggacaagttagtg
gttttatggagtatccaggaccatataacaactgccgcctcagacgctgctgcctcaaag
tcaccaggatctggtggttctatcataaaaaaggcaggagaagcaaatgataaaactgct
gaagggccttctattgggccacgaggagtttaccatggccacgaggatactgttgaagat
gttaccttctgtccgtccaatgcacaggagttttgcagtgtgggagatgattcttgcctg
atattatgggatgctcgtactggcactagcccagctgtaaaggtcgaaaaagcacataat
gctgatcttcattgtgttgattggaatccccatgatgataatcttatcataacaggttca
gcagataattctattcgcttgttcgatcgtcgtaatctcacttctaacggagtaggctca
cccatctataaatttgagggtcacaaagctgctgttctttgtgttcagtggtccccagat
aaatcatccgtctttggaagttctgcagaggatgggctgttaaacatttgggactacgat
aaggttggtaaaaagacagaacgagctacaaggacacctgctgctcctccaggcttattt
ttccagcatgctgggcacagggataaagtcgttgatttccattggaatgcttctgatcca
tggactcttgtcagtgtatctgatgattgtgatacgactggtggaggagggacgttgcag
atatggcgcatgagtgatctaatttatcggccggaagatgaggtgttagctgagcttgaa
aagttcaaatctcacgtaattgaatgtgctgcaaagccttga
DBGET
integrated database retrieval system
