Cucurbita maxima (winter squash): 111466809
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Entry
111466809 CDS
T05246
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111466809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111466809
04121 Ubiquitin system [BR:
cmax04121
]
111466809
03036 Chromosome and associated proteins [BR:
cmax03036
]
111466809
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111466809
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111466809
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111466809
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111466809
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111466809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
zf-RING_6
Prok-RING_4
zf-RING_5
PHD_NSD
RTT107_BRCT_5
PTCB-BRCT
zf-RING_10
DUF3573
Motif
Other DBs
NCBI-GeneID:
111466809
NCBI-ProteinID:
XP_022967204
UniProt:
A0A6J1HW43
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MADFSSNVRANANTSRFLNPWVLHFQKMGLELKCPLCLSFFDEPVLLPCDHLFCKGCMPF
ASQIGSECPLCKAGFVDRDLRPAPFMDKMVSIYRSLDATFATNMSKLVSAVDVGATVEKS
RFVQSTPRAGPNCKEFQGCSMPADCKCENLDIESRKGSYGRHEDCRMPPVSQTDQLSAGS
PPPFGDGKVSDDSSDEYRGHGSKNASDRRSVIANADDKKLQLSKCTSSVSEEEGHLRDHK
RQKLDYGQLKSGSSSVDQTHPPASELGNSETSNSEMEQKSQVTIASNLPLDDAEDAIVRN
AKCAFCQSSKVTEDTGPVLHYLNGSLVVGVEAENPNVIHAHKLCVDWAPQAYYQGDDVHN
LKSEVARGSKLKCSKCGLKGAALGCYSKSCQKSYHVPCALEIEECRWDTDNFLLLCPSHS
SARFPDERSKSRRMPRNQASPFRMNQQDSNNWVSPPDGVKKWAFCGSALSAEERNILIKF
AKISGATVSKFWKPDVTHVIASTSENGACTRTYKVLMGILNGVWILNMDWVKACMKERRP
LNEEPYEIALDNYGCIDGPKSGRLRVLNNAPKLFTGLSFYFTSDFPPAYEEDLQDLVITA
GGTILENEELAVPSCSSDQASAPKVLVVYNLDSPGGCKVGEEVSILWQRLNDAEGIAAKV
GAQVIGHTWLVESIAAGNLQPFVSC
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttttcaagcaatgttcgtgctaatgctaatactagcagattcttgaaccct
tgggtgcttcatttccagaaaatgggacttgagcttaaatgtcctctctgcttgagcttc
tttgacgaaccagttctgcttccttgcgatcatctcttttgcaagggctgcatgccgttt
gcgtcacagattggatcagagtgccctttatgcaaagcaggatttgtcgaccgagacctg
aggcctgctcctttcatggacaagatggtgtcaatctacaggagtctggatgcgacattt
gctactaatatgtctaaactagtctcagctgtagacgttggggcaactgtggagaaatca
cgttttgttcagtctacccctcgtgctggccccaactgcaaggagtttcagggatgtagc
atgcctgctgattgtaagtgtgaaaatctcgatattgagagtagaaagggtagttatggg
aggcatgaagactgtagaatgccgcctgtgagtcagacagaccagttatcagcaggaagc
cctcctccgtttggtgatggcaaggtgtcagatgacagtagtgatgagtaccgtggtcat
ggatctaaaaatgcttcagacaggagatctgttatagctaatgccgatgataagaagctg
caattgtctaagtgtacgagttctgtttctgaagaggaaggtcacctgagggaccacaag
agacaaaagttggattacggccagttaaagtcaggctcaagcagtgtcgatcaaacccat
cctccagcttcagaacttggaaattcagagacttcaaattctgaaatggaacaaaaatct
caagttactattgctagcaatctgcctcttgatgatgcagaagatgccattgtgagaaat
gccaaatgtgcattttgtcagtcttctaaagttacagaggatactggacctgtcctgcat
tatttgaatggcagtttggttgttggagttgaagcagaaaatccaaatgtcatacatgct
cataagctttgcgttgattgggcaccacaggcatactatcaaggcgatgatgttcataat
ttgaagtctgaagtggcaaggggttcaaagctcaagtgtagtaaatgtgggctaaaagga
gcagccctgggttgttattcgaagtcttgccagaaaagctatcacgtgccttgtgcactt
gaaatagaggagtgccgttgggacacggataattttcttcttctgtgcccctcgcattca
tcagcaagatttccagatgaaaggtccaagtccaggaggatgccgagaaatcaggcttct
ccatttcgaatgaaccagcaagattcaaacaattgggtatctccaccagatggggtaaaa
aagtgggcgttttgtgggtcagctctgtctgctgaagaaaggaatattttgatcaagttt
gcaaaaatatctggtgccactgtgtccaaattttggaagccagacgtgactcatgttatt
gcatccacatctgagaatggtgcttgtactcggacatataaagtccttatgggcatattg
aatggagtatggattctgaatatggattgggtaaaagcttgcatgaaagaacggcgtcct
ttgaacgaggaaccttatgaaattgctcttgacaactatgggtgtattgatggtcccaaa
tctggcaggctgagggttttaaacaatgcacccaaactcttcactggcttaagtttctat
tttactagtgactttccacctgcttacgaggaggatcttcaagatttggttataactgca
ggaggtaccattttagagaacgaagaattggcagtaccaagttgtagtagtgaccaggcg
tctgcaccaaaggtactagtcgtttataatctcgactcccctggaggatgcaaagttggg
gaggaggtttcaattctctggcaaagattaaatgatgctgagggaatagctgctaaggtt
ggagcccaagtcattggtcatacatggcttgtggaatccattgcagcgggtaacttgcaa
ccttttgtcagctgctaa
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integrated database retrieval system
