Cucurbita maxima (winter squash): 111466826
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Entry
111466826 CDS
T05246
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111466826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111466826
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111466826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
111466826
NCBI-ProteinID:
XP_022967231
UniProt:
A0A6J1HRF9
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSLDLMLKPSCSGCGSTTELYGSNCKHMTLCLSCGKTMAENKGKCYDCGATLTRLIREYN
VRSSASSDKNYCIGRFMSGLPNFSKKKNAENKWSLYKEGLQGRHLTDALREKYKNRPWVL
EDETGQFQFQGHLEGSQSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAANNGAAAFGEVEKFDDKEGARAGGRGRRKATGDENEGNASDRG
EEDEEEEATRKNRLGLNKKGGGDDDDDEGPRGGDHDMDDDDIEKGDDWEHEEIFTDDDET
TAPDREEREDLAPEVPAPPEIKQDDEDEEDEENEGEGGLSKSGKELKKLLRRTGGLNDSD
GEDDDDDDDEEDTGDTPVLPSKQKDTVKEEAASSSPSKPTPSGSAKGTPSTAKTAKGKRK
NGEDVKPSSAPPKKMKTETESKPTDEALSTSKSTASKGAPVSVKTESASNSGPVTEEEIR
AVLRQRTPVTTQDLVAKFKARLRCKEDKNAFAEILRRISRIQKTNGGPSYVVLRKPED
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggatttgatgctgaagccatcgtgcagtggatgcggatccacgacggagctg
tatgggagcaattgtaagcacatgacattgtgcttgtcctgtggcaaaactatggctgag
aacaagggaaaatgttatgactgtggcgctaccctaactcgcttaataagagaatacaat
gttcgatcaagtgcaagtagcgacaagaactactgcattggtaggttcatgagcgggctg
ccgaacttttcaaagaagaaaaacgctgagaataaatggtctctttacaaggaaggtcta
caaggacgccaccttacggatgcccttcgggaaaagtacaagaatagaccctgggtcttg
gaagatgaaacgggtcaatttcaattccaaggtcatctcgagggctcacaatcagcaaca
tattacttgcttgtattgcaaggaaaggaatttactgccattcctgcaggttcttggtac
aacttcaacaaagtggcgcagtataagcaacttactttggaggaggcagaagaaaaaatg
aagaatcgaaagaagacggcagatggatatgaaagatggatgatgaaagctgcaaataat
ggtgctgctgcatttggtgaagttgagaagtttgatgacaaagaaggtgctcgcgctggt
ggtaggggacggagaaaagctactggtgatgagaatgaaggtaatgcctcagatagggga
gaggaagatgaagaagaagaggcaacaaggaagaacagattgggactcaataaaaagggt
ggcggtgacgacgacgacgacgaaggtcctaggggaggtgaccatgacatggatgatgat
gatattgagaaaggagatgattgggagcatgaagagatttttactgatgatgatgaaact
actgctccggatcgtgaagaaagggaggatttagcccctgaagttcctgcacctccagaa
atcaagcaggatgacgaagacgaggaggatgaagaaaatgaaggggagggggggttgagc
aaatctgggaaagagttgaagaaattgcttaggcgtactggagggcttaatgattcagat
ggagaggacgatgatgacgacgacgatgaggaggatactggtgacactccagttttgcct
tcgaagcagaaggatacagttaaggaagaagctgcgtccagcagtccctcaaaaccaaca
ccttctggatctgctaagggaaccccctccactgcaaagacagcaaaaggaaaaagaaaa
aacggcgaggatgtgaaaccatccagtgcacctccgaagaaaatgaaaacagagacggaa
tcaaagcctacagatgaagccttgtctacttctaaaagtacagcctcaaaaggtgcacca
gtatcggtcaaaactgaatcagcatcgaattctggacccgttactgaggaagaaattaga
gcggtcttgcgccaaaggacacccgtaacgacgcaggatcttgttgcgaaattcaaggca
agactacgatgtaaagaggacaagaatgcttttgcagagatccttaggagaatctcaagg
attcaaaagacgaatggaggaccgagttacgtcgtgctgagaaaacccgaagactag
DBGET
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