Cucurbita maxima (winter squash): 111466963
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Entry
111466963 CDS
T05246
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111466963
09123 Folding, sorting and degradation
03018 RNA degradation
111466963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111466963
03041 Spliceosome [BR:
cmax03041
]
111466963
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111466963
mRNA degradation factors
5'-3' decay
Lsm complex
111466963
Spliceosome [BR:
cmax03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111466963
Complex C
U2 snRNP components
111466963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
111466963
NCBI-ProteinID:
XP_022967419
UniProt:
A0A6J1HWN2
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLSIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttctcgtacttcaaggatttggtgggcagagaggtgacagtcgagttgaaa
aatgacctatcaattagaggaactctgcactccgttgatcaatatctcaacatcaaactt
gaaaacaccagggttgttgatcaagacaaataccctcacatgctttctgtgagaaactgt
tttatcaggggatcggtggtgagatatgttcaacttccaccagatggcgttgatatcgag
ctgttgcacgatgccacgagacgcgaggctcggggtggctaa
DBGET
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