KEGG   Cucurbita maxima (winter squash): 111467097
Entry
111467097         CDS       T05246                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111467097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111467097
   03041 Spliceosome [BR:cmax03041]
    111467097
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     111467097
Spliceosome [BR:cmax03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111467097
SSDB
Motif
Pfam: WD40 WD40_Prp19 EIF3I WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 111467097
NCBI-ProteinID: XP_022967656
UniProt: A0A6J1HSS1
LinkDB
Position
Unknown
AA seq 370 aa
MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS
CISKLHSGYGNTKSLLAAEPHCFLQGHDGPAYDVKFFDAGDNTLLLSCGDDGHIRGWRWN
ECTDIEVPIYLQGSHIEPVMDLMNLQYKGPWGALSPIPENNAIATNTQSGSIFSAAGDSC
AYCWDLESGKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKTGKCIQLIDPA
KDNKKQKGNFSCVRCIALDASESWLACADGRSFSVWNLPASDFISRTLTRSSMQDMVFCD
NQILGVGAEPLLTRFDIHGSILSEIQCAPQSAFSVAVHPSGVAAVGGYGGLVDVISQFGS
HLCTFFCQYR
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgttgggggacgcgacgaattgggacgaggatgcttaccgagagagtctatacaaagag
agagaggtacaaactcggacggtgttcagaactgcgtgggcgccgtctttaagtggttgc
cctgagtccatcgtggtcgcctccagtgatggatccattgcctcttattctatcgcttcc
tgcatctctaagctgcattctggttatggcaatactaaaagtttgctggcagcagagcct
cattgctttctgcaagggcacgatggacctgcatatgatgttaaattttttgatgctggc
gacaatactttattactgagctgcggggatgatggtcacattcgaggatggaggtggaac
gaatgcacggatatagaggtgcctatatatttgcaaggtagtcatattgagcctgtaatg
gacctgatgaatcttcaatacaaaggtccctggggtgctctttctccaatccctgaaaat
aatgcaattgctaccaatacgcagagtggatccattttttctgctgctggagattcttgt
gcgtattgttgggatttggagagcggtaaaattaagatggtgtttaaagggcactctgac
tacttgcactgtatagttgcccgaaacactgtcaatcaaatcataactggttcagaagat
ggtacagcacgaatatgggattgcaagactggaaagtgcattcaactaatcgacccagcg
aaggataataagaagcagaaagggaacttttcttgtgttagatgcattgctcttgatgca
agtgaaagctggttggcctgtgctgatggtcggagtttttcagtttggaaccttccggct
tcagatttcatttcaagaactttgacccgttcttcaatgcaggatatggttttttgtgat
aatcaaatactaggcgttggagcagaaccattactaactcgattcgacatacatggatca
attctctcagaaatacaatgtgcccctcaatccgctttttctgtcgctgtgcatccatct
ggcgtcgcagcagtcggaggctatggtggtctcgtggacgttatctcacagtttggaagc
catttatgtacattcttctgtcaatacagatga

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