Cucurbita maxima (winter squash): 111467558
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Entry
111467558 CDS
T05246
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111467558
Transcription machinery [BR:
cmax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111467558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
111467558
NCBI-ProteinID:
XP_022968276
UniProt:
A0A6J1HXK0
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MGVVTVSSSAARSPLRLGAIFSNHNSSKRPSIVAFKVDKHTDTTLVSPHEQVILPVESNN
RNQKRSGKTSKSLKRVKAVFIDEATPCTLDVDYYEAAAKLENIFKLSSVTEDTDLECEDG
RPKRRQQRRKKPDKRPSDGIVRNHTRRIKRLDLDKRIALKSNKEGKAAPSLRKQKDTVSE
ADETDDLVRNYPVSTDMVSLDWKKMKIPPVLSSSEHTRLFKLVQPMKELIQVQEELQKEL
GREPTEGELVDATNMNVIQVRRQLEVGRAARNNLIKHNLRLVLFVINKYFEDFASGPKFQ
DLCQAGVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVDI
QRAKLELSCEHHRLPTEEEIIAKVGISPERYLEVMRAIKPVYSLHSRHSTTSEEFINAIT
DVEGTGGDNQRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISR
EMVRKHEVKALMKLKHPARVDYLRRHLI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttcaagctctgcagcacgatctcctcttcggctgggcgcaata
ttctccaatcacaattcgtcgaaaagaccatcgattgtcgcttttaaagtggataagcac
actgacactactctggtctcacctcacgagcaagtgatcctgcctgtggagagtaataac
agaaaccagaaaagatcaggaaaaacaagcaaatctttgaagagagttaaagctgtcttt
attgatgaagctactccctgcactttggatgtggattactatgaggctgctgctaaactt
gaaaacatattcaagcttagctctgtgacagaggataccgatctggaatgtgaagatggc
agaccgaaaagacgccagcaaaggaggaaaaaaccagacaagagaccaagtgatggcata
gtcaggaaccatactaggaggattaagcgactagatctagacaagaggatagcattgaaa
agtaacaaggagggaaaagcagctccttcattaaggaaacaaaaagataccgtaagtgaa
gctgatgaaactgatgatcttgttagaaactaccccgtgtcaactgatatggtaagtttg
gactggaaaaaaatgaagattcctcctgttcttagttcatcagagcatacccgtttgttc
aagttggttcaaccaatgaaggaacttatccaagtacaagaagagctgcagaaagagttg
ggaagagaaccaactgaaggagaattggtcgatgcaacaaatatgaatgtaattcaagtg
aggaggcaactggaggttggtcgtgctgccagaaacaatctcatcaagcataatctccgc
cttgtactgtttgtgatcaacaaatactttgaagattttgcaagtggcccaaaatttcaa
gacctttgtcaagcaggtgtcaagggactcattacagcaatcgaccgctttgagccaaag
aggagattccggctatcaacttatgctttattttggataagacatgctattattcggtcg
atgactctctcaagcttcacacgtgtctcatttggactcgactcggtaagagttgatatt
caaagagctaaacttgagttatcatgtgagcatcatagattaccaacagaggaagagatt
attgcaaaagttggcatctcgcctgagaggtacctagaagtaatgagggctataaaacca
gtttactctctccattctaggcactcgactacatcagaagagtttatcaatgcgatcact
gatgtagaaggtactggaggtgacaaccagcggcaaccagctcttctgaggcttgctctt
gacgatgtgcttgattctcttaagccaaaggagagcttggtgatcagacaaagatacggt
cttgatgggaaaggaaaccgaacattaggtgagatagcaggaaatctaaatatttcaaga
gagatggtgcggaagcacgaagttaaagctctgatgaagctcaaacatcctgcaagagtg
gattaccttcgtcggcatttaatctga
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