Cucurbita maxima (winter squash): 111467562
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Entry
111467562 CDS
T05246
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03420
Nucleotide excision repair
cmax04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111467562
09124 Replication and repair
03420 Nucleotide excision repair
111467562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmax03051
]
111467562
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111467562
Proteasome [BR:
cmax03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111467562
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111467562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
Rad60-SLD_2
Ubiquitin_2
Dsc3_N
TECR_N
NQRA_N
Motif
Other DBs
NCBI-GeneID:
111467562
NCBI-ProteinID:
XP_022968287
UniProt:
A0A6J1HT74
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS
ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE
LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED
LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtcaagactctcaagggctcacacttcgaaatcgaagtgcagcctcaa
gatatggttgctgatgtgaagaaaaaaatagaaactgttcagggtgctgatgtttaccct
gctgcacagcagatgcttatccatcagggaaaagtccttaaagatggcacaacactggat
gaaaataaagttgcagaaaatagttttattgtaatcatgttaacaaagaataaaagttca
tcgggtgggacgtcttctaccacacaagctgcaccagtgtcaaaggcaccacagaacact
gcccctgcacctgctgcaactccagtctcaacatctgaagttcctctgccaacttctgca
cctccggctactattaccacctcttctcttccagctcccgctccagcgccagctcaggca
cctgcaaccactgtcttgccagaatctgatgtctacagccaagcagcttctaacctggtc
gcgggcagtaacttggaggagactatccaacagattcttctcatgggcggagggatttgg
gatagggacactgttgttcaagctcttcgtgctgcttacaataatccagaaagggctgtt
gattacctttattctggcatacctgaacaagttgaagttccacctgctgctcatgttccg
tctactgttccagtgaccaacccttccgctcaacctgcacagcctgcccaacctgcgtct
gcgacagccactggtccaaatgctaatccattagatctctttcctcagggtgtacctaat
ttagcttccggagccgttagttccggcagtcttgattttctacgaaatagtcctcagttc
caagctttgcgagctatggtgcgagctaaccctcagatactccagcctatgcttcaagag
ttgggtaaacaaaatcctcagcttattagacttattcaagatcatcaacctgacttcctc
cgcttgattaatgagcctcttgaaggagaagggaatgtacttgggcagcttgctgatgct
atgccgcaggctataactgtaaccccagaggaacgggaagccattcaacggcttgaggat
ttaggtttcgacagagctctagtggtggaggttttcttcgcctgcaacaagaacgaggaa
atggctgcgaactaccttttagatcatattcacgaatttgagggtaatcagaattaa
DBGET
integrated database retrieval system