KEGG   Cucurbita maxima (winter squash): 111467562
Entry
111467562         CDS       T05246                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03420  Nucleotide excision repair
cmax04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111467562
  09124 Replication and repair
   03420 Nucleotide excision repair
    111467562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cmax03051]
    111467562
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111467562
Proteasome [BR:cmax03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    111467562
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111467562
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 CUE Rad60-SLD_2 Ubiquitin_2 Dsc3_N TECR_N NQRA_N
Other DBs
NCBI-GeneID: 111467562
NCBI-ProteinID: XP_022968287
UniProt: A0A6J1HT74
LinkDB
Position
Unknown
AA seq 398 aa
MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS
ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE
LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED
LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgaagattttcgtcaagactctcaagggctcacacttcgaaatcgaagtgcagcctcaa
gatatggttgctgatgtgaagaaaaaaatagaaactgttcagggtgctgatgtttaccct
gctgcacagcagatgcttatccatcagggaaaagtccttaaagatggcacaacactggat
gaaaataaagttgcagaaaatagttttattgtaatcatgttaacaaagaataaaagttca
tcgggtgggacgtcttctaccacacaagctgcaccagtgtcaaaggcaccacagaacact
gcccctgcacctgctgcaactccagtctcaacatctgaagttcctctgccaacttctgca
cctccggctactattaccacctcttctcttccagctcccgctccagcgccagctcaggca
cctgcaaccactgtcttgccagaatctgatgtctacagccaagcagcttctaacctggtc
gcgggcagtaacttggaggagactatccaacagattcttctcatgggcggagggatttgg
gatagggacactgttgttcaagctcttcgtgctgcttacaataatccagaaagggctgtt
gattacctttattctggcatacctgaacaagttgaagttccacctgctgctcatgttccg
tctactgttccagtgaccaacccttccgctcaacctgcacagcctgcccaacctgcgtct
gcgacagccactggtccaaatgctaatccattagatctctttcctcagggtgtacctaat
ttagcttccggagccgttagttccggcagtcttgattttctacgaaatagtcctcagttc
caagctttgcgagctatggtgcgagctaaccctcagatactccagcctatgcttcaagag
ttgggtaaacaaaatcctcagcttattagacttattcaagatcatcaacctgacttcctc
cgcttgattaatgagcctcttgaaggagaagggaatgtacttgggcagcttgctgatgct
atgccgcaggctataactgtaaccccagaggaacgggaagccattcaacggcttgaggat
ttaggtttcgacagagctctagtggtggaggttttcttcgcctgcaacaagaacgaggaa
atggctgcgaactaccttttagatcatattcacgaatttgagggtaatcagaattaa

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