KEGG   Cucurbita maxima (winter squash): 111467887
Entry
111467887         CDS       T05246                                 
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03420  Nucleotide excision repair
cmax03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    111467887
   03460 Fanconi anemia pathway
    111467887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111467887
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111467887
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC
Other DBs
NCBI-GeneID: 111467887
NCBI-ProteinID: XP_022968743
UniProt: A0A6J1HYZ8
LinkDB
Position
Unknown
AA seq 388 aa
MEQGDEEENLQQTAAHKKMKTIIKISSYQEVIDSSQPKSQSFSQAFAFLKSTEFYSPPPQ
PVPASSSQSLPDSDITNPRKNDQLDTSCSSTSASAATPANSLSASSSVTRNAILVSNRQR
GNPLLKHIRNVRWTFADVVPDYLLGRSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRV
VLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMD
TDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHVMDASMEDLARCPGIGERKVRRLYDT
FHEPFKRVVSTHPAVLETPTQNNTEPRLVGEEQDVDGKSTEDASQHKKEPELNIKSALSA
AFAKYSAKIGKSSKPEGEEKEHENSNSQ
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggagcaaggagacgaggaagagaacttacagcaaaccgccgctcacaaaaagatgaag
actattatcaagatatcctcttatcaagaagtaatcgacagctcacagccgaagtctcaa
tccttctcccaagcctttgcgttcctcaaatccactgagttttactcacctcctcctcaa
ccagtccctgcctcctcctctcaatcattgccggattctgatatcacaaaccctagaaaa
aatgatcaattagacacttcatgttcttcaacatcagcttctgcagctactccagctaat
agcttgtcggcgtccagctctgttactcgcaatgccattcttgtcagcaatagacagagg
ggaaatccacttctcaaacacattaggaatgtgagatggacttttgctgatgttgtaccg
gattacttactcgggcggagctcttgtgctctctatctaagtcttcggtatcatctactg
catccggactatctatactaccgtataagagaactacaaaagaatttcaagcttcgagtc
gtattgtgtcatgtcgatgtggaagatgttgtcaagcctttgcttgaagtcaccaaaaca
gctctacttcacgattgtacccttctttgtgcttggagtttggaggagtgtggtcgttac
ttggagactataaaagtttacgaaaacaagcccgcagatcttattcaaggtcagatggac
actgactacctctctcggctaactcatgtcctaacatcagttcggcatgttaacaagact
gatgtggttaccctcgggacgacatttgggtctctgtctcatgtcatggatgcatcaatg
gaagatctagctcgttgccctggcataggtgaacgcaaggtaaggcggctgtacgacact
tttcatgagccattcaagcgcgttgtttcaacccatcctgccgttctagaaaccccaacc
cagaataataccgaacctcgcttggttggtgaagaacaagatgtggatgggaagagcaca
gaagatgctagccaacacaaaaaagaacctgaattgaacatcaaatcagctctgtctgct
gcttttgccaaatattctgctaaaattggtaaaagtagtaagccagaaggagaggaaaaa
gagcatgaaaatagcaactcgcagtga

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