Cucurbita maxima (winter squash): 111468307
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Entry
111468307 CDS
T05246
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04120
Ubiquitin mediated proteolysis
cmax04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111468307
04120 Ubiquitin mediated proteolysis
111468307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111468307
Enzymes [BR:
cmax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111468307
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
U-box type E3
111468307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
111468307
NCBI-ProteinID:
XP_022969252
UniProt:
A0A6J1HVU6
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MATSKSQRSPEEVEGIILRKVFLVSLTPPSDSDSDSRTVYLEQTAAELLSEGKQLRISRD
VMERIIIDRLSGNFLSAEPIFQYLIGCYRRAHDETKKIASMKDRNLRSEIEMALKQAKKL
TVSYCRIHLGNPELFSGGDLGTNSTTSPLLPLIFSEVGSSMDGFGASTSVGGALQCPPGF
MDEFFRDSDFDTLDPILRGLYEDLRGTVLKVSALGNFQQPLRALRFLVSFPIGAKSLVNH
PWWIPPGKYSNGRVIERTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPSDLLS
SFTTIKTVMNNLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASS
GMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTDWINN
GTQLKTDNSGQFNDSESRLLQSQEASSSGSNATIESSTAKARLNSEKTRYPFICECFFMT
ARVLNLGLLKAFSDFKHLVQDISRCEDTLATLKAMQGQGPAPQLEMDVARLEKEIELYSQ
EKLCFEAQILRDGSLIQQALTFYRLMVVWLVGLIGGFKMPLPSSCPMEFASMTEHFVEDA
MELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSS
VTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHR
NAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQE
RQERTRLFHSQENIIRIDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQL
VGPQRRSLSLKDPEKYEFRPRELLKQIVHIYVHLARGDKENIFPAAISKDGRSYNEQLFN
AAAVVLRRIGEDGRIIQEFIALGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPV
ILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTSDMLIPNEELKARIKEFIMSKKLKRQPD
GGVAMQSSKATIQPTSGEMLID
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccaaatcccaaaggtctcctgaggaggtggaaggcattatccttcgcaaa
gttttccttgtctctctcacccctccttccgattccgattccgattctcgcaccgtctat
ctcgagcaaaccgccgccgaactccttagcgaaggcaagcaattgaggatttcgagggat
gtaatggagcgtattataattgatcgtctatccggtaatttcctctctgccgaacctatt
tttcagtacctaatcggctgctatcgtcgggctcacgacgagactaagaaaattgcctcc
atgaaggataggaatttgcggtctgagattgagatggcgctcaaacaagccaagaagttg
acggtttcctattgtaggattcatttggggaatcctgaattgttttcgggtggggatttg
ggtactaactccactacttcgcctttgcttcctttgattttctctgaagttggtagctcc
atggatggatttggggctagtaccagtgttggtggagctcttcagtgccctccgggtttc
atggacgagtttttccgggattcggattttgatacattagaccccatattgagggggttg
tacgaggatttgaggggtaccgtccttaaagtttcggctcttgggaacttccagcagccc
ttaagggcacttaggtttcttgttagttttcccattggggctaaatctttggttaatcat
ccatggtggattccccctggtaaatattccaatggccgtgtcattgagaggacaagtatt
ttggggcctttcttccatgtcagtgctctgcccgaccatgccatttttaagagccaacct
gatgttgggcagcaatgcttttcagaagcatcaactcgtagaccatctgatttactgtct
tcattcactacaattaaaacagtcatgaataacttatatgatggtcttgcggaagttctt
ctctctcttcttaagaacacggagacccgtgaaaatgttcttgagtatcttgcagaagtg
ataaatagaaactcatcaagggctcatatacaggttgatcctctctcctgtgcaagttca
ggcatgtttgttaatctcagtgccatcatgcttcgtctttgtgagccatttctagatgca
aacttgaccaaaagggataaaattgatccgaaatatgtatgttatggtaaccgcttggag
ttaagaggattaactgctctacatgcatcgtctgaagaagttacagactggattaataat
ggtactcagttgaaaactgataactccgggcagttcaatgacagtgaaagtcgcttgctg
caatcccaagaagcttctagttctggcagtaatgctacaattgaatcttctactgcaaag
gcaagattgaatagtgagaagactaggtaccctttcatatgtgagtgtttctttatgact
gcaagggtgctgaatttgggcttgttaaaagcattttcggacttcaagcatttagtacag
gatatatctaggtgtgaagatacattggccacactcaaagccatgcaaggacaaggacct
gctccacagcttgaaatggatgtagctcgccttgagaaggaaatagagttgtactcacag
gaaaagctttgttttgaagctcaaatactgagggacgggagtctaatccagcaagctctt
actttctatcgattaatggtcgtatggttagttggtttgattggtggatttaaaatgcct
cttccatcaagttgcccgatggaatttgcatccatgacagagcattttgtggaagatgca
atggaattgcttatatttgcttcccgaattccaaaagctttggacggtatcaatttggat
gattttatgaacttcatcattatgtttatggcaagtccggaatatattagaaatccttac
ttaagagcaaagatggttgaagttctcaactgctggattcctcgtagaagtggttcatct
gtaacagcaacattatttgaaggccaccaactatcactcgagtatcttgttaggaatctc
ttaaagctttatgtggacattgagttcactggttcacatacacagttttatgacaagttc
aacatccgtcataatattgccgaacttcttgaatacctttggcaggttcctagtcatcgt
aatgcttggagaatgattgccaaggaagaggagaagggtgtttacttgaatttcttgaac
ttcctaatcaatgatagcatatatcttcttgatgaaagccttaataagattctcgaactt
aaagagcttgaagctgaaatgtcaaatactgcagaatgggagcagcgacctgctcaagag
aggcaggagagaactaggctatttcactcccaagaaaatatcatccggattgacatgaaa
ttagcaaatgaggatgtgagtatgctggcatttacaacagagcaaatcacagctcctttc
ctacttccagagatggtcgaacgggtggccagcatgcttaattatttcctcctgcaactt
gttggtcctcagcgaagatctcttagtctgaaagaccctgaaaagtacgaattccgtcca
agagagttgcttaagcagattgttcacatatatgttcatctggcgagaggcgataaggag
aatattttcccagctgccatttcgaaggacggcagatcatataacgagcagttgttcaat
gctgcagcagttgtacttagacgaattggagaagatggtaggataatacaggaatttatt
gctcttggtaacaaggcgaaggatgcagcttcagaggccatggatgctgaggctactcta
ggagatataccggatgaattccttgacccgatccaatatactttaatgaaggatcctgtg
atcttaccttcttcaaggatcacggtcgacagacccgtcattcaaagacatctccttagc
gatagcaccgacccgttcaaccggtctcatctgacttcggacatgctaataccaaacgaa
gaactgaaagcaaggatcaaagagttcatcatgtcaaaaaaattgaagaggcaaccggac
ggaggggttgcgatgcagagtagcaaggcgacgatccaacccacaagcggagaaatgttg
atcgattaa
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integrated database retrieval system
