Cucurbita maxima (winter squash): 111468397
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Entry
111468397 CDS
T05246
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111468397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111468397
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111468397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
111468397
NCBI-ProteinID:
XP_022969370
UniProt:
A0A6J1HZR2
LinkDB
All DBs
Position
Unknown
AA seq
2074 aa
AA seq
DB search
MAHLFISDEEFSRHSNDAAFIAEKADAFIQGLYSELETVRAQADAASITAEQTCSLLDQK
FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQTHQLNLLSIGKDGEIERLNTELSEL
HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEIDMELVRSRAEL
AHLSQEKELVERHNAWLNDELTAKVGSIIEMRRLHSDTEAEMSAKLRDVERQLDECSSTL
KWNKDSVKELEMKLTSAQEELCSSRKLAAENEERLCAEISTVNKLVELYKESSEEWSKKA
TELEGVIKALETHLNQVESDYKEKLVKEESERNRLEEVAADLKVKLEKCEAEIELSRKKN
ELTLCPISSFAPDVLINPKESCDVVDDYHKFEPRVPVGVSGTALAASLLRDGWSLAKMYA
KYQETVDALRHEQMGRKEAEAVLQRVLCELEDKAEVILEERAEHEGMIESYSLLNQKLQH
SISEQAILEKSVQELKAVLKRHERDYMLIQRENVDLSRQVTILLKECRDVQLRCGSAGHD
VLENLSTATSFQINVESDADRVISEYLQLTFKDINGLVEQNVQLRSLVRKLSVQLQDTEL
DFKEKLEAELKSKTQEAASRVEAVLQKVEEQGQMIESLHASVAMYKRLYEEEQKRSLPHS
HSAGVALADFCRKELKFVSEDSQEDTKAALDQASKRVRSLEEELEKSRSEINLVRAERNK
FELESGFAKEKLASFMKEFEQQRVEMNGVLARNVEFSQLLVDYQGKLRKVSESLHSADEQ
SRKLSIEVSILKSEKELLSNAEKRAHDEIRNLSERLFRVQASLDTIRSVEEVHEEARVVE
RRKLEEHAKQLEREWAEAKKELQEERDNVRTLTLDREKTLKNAMSHVEDMGKELANALHA
TAAAEARAAVAEAKLFDLEKKISSSANQVIELDDRSGLKSHPSNQVGIDLHRTEAEIKKF
KEEAQACKEHMLQYKSIAQVNEEAVKQMECAHESFKIEAEKMKKSLEVELLQLRERVAEL
ENESILKSQEIASAARLKEEAIASSLADVRNLNEENAAKTSKILEMEIQISYLKEDLERE
QQKWRTAQANYERQVILQSETIQELTKTSQALASLQEEAAELRKLADAYKTENEELKAKW
EGGKVALEDFKNKADKAYNELNEQNKILHAKLEAFHIRLAEKDQKLAGVSSELNTEMVGD
SGMQSVVSYLRRTKEIAEVEISLLKKDKLRLQSQLESALKAVESAQTSLNAERQSSKALL
LTEEEIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLREEFRKAKSETENFESMLKM
RQVEVEACKMEIESQKVEKAHLESRVSELLEKSKNIDYEDYNRVKDDVQRMQMELNEKDA
EIAKIKMLITERQESISQLEQDLSSCRFELKEREKKLNDVQHIEANLRTDMEKQKKFFSQ
FKRKLEIVSKEKDELGKENQALLRQLEDIKQVNVFGKRSTGDSTGEQTIEEKDTKIQILE
KHLERLREELKREKEDSRTEKSRRLKIEKAIKDSYTIVEQEKSKILNDLEKHKGNLKQAS
DELEKLRQSKSNLSEDALPQPLSGIGLDDLASTYVLAAENFEKTVQSVLTDLGAQNATSE
VSLVTDALVQSSTGPDVPLQTPDVAVPVAPVTTNFPVKILEEREKKGQLSKAKVETRKAG
RKLVRPRLGKPGGSLGDIDMSTSELPNSESKRATSGKSETESESTTSAHQLARKRVATAS
ELHEHAVIPGESITEMAAPVMKKAKGSDTLADDVGGPSSTSLESLKTQSPLEEVPDVCEF
PHGSSEDAADVEKEVEIAGEKADRPKELSSDGSISHEEIHTDRMDENLDKQIVAVSDDGL
KDQAEPDNWHLTSEIGSEREEGEVAPEVMELEGANNVESIEIGDDHIEPVATPDASPSRV
DDDAMAVTDMEIGEINSPEIQNEEKNDEGDAAEETSEILDKPTDSNQIDMESDQAVETTS
VATENVSSTPPEINDSKQGSPIVAKRSSPVGSSTSTTINLQERAKERAMLRQAGVVSSLD
RRPVRGLRGRGGRIERGGRGQRSGRGPPGESGRS
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggcccacttattcatctccgacgaggagttctctcggcactccaacgacgctgctttt
attgccgagaaggccgatgccttcatccaaggtctctatagcgagctcgagaccgtcaga
gcccaagctgatgctgcttcaatcactgcggagcagacttgttctcttcttgatcagaag
ttcctctctctttccgctgagttctctgacctccagtctcaaaatgcacaacttcaaacg
accctcgaacttagactctccgagcttgccgaagtcaagtcccaaacgcatcagcttaat
ctactttccattgggaaggatggggagatagagaggttaaatacagagttatctgagttg
cataaatcaaaaaggcagttgatggagcttattgagcacaaggacttggaaattggtgaa
aaagattccactataaagagttatcttgataagattgtcaatttgtctgagacagctgct
caaagagaagctcgtatcagtgagatcgacatggagttggtgcgctcccgggctgaattg
gctcatctttcacaggagaaagaacttgttgagaggcataatgcgtggcttaatgacgag
ttaactgctaaagtaggcagtatcatagaaatgcgtaggcttcattctgatactgaggct
gaaatgtctgccaaacttagagatgttgagagacagttggatgaatgctctagcacctta
aaatggaacaaggatagtgtgaaagaacttgagatgaagctaacatctgcacaggaggaa
ttgtgttcgtcaagaaaacttgctgcagaaaatgaggaacgtctttgtgctgaaatatca
acagtcaataagcttgtcgaactttacaaagaaagttctgaggagtggtctaagaaggca
acagaactcgagggtgtcataaaagccttggagacacacttgaaccaagttgagagtgat
tataaggagaagcttgtaaaggaagaatctgaaagaaatcgtttggaagaggtggctgca
gatttgaaagtgaaactggaaaagtgtgaagcagagattgaacttagtaggaaaaagaac
gaactcactctttgtcccatcagcagctttgctccagatgttttgataaatccgaaggaa
agttgtgatgtggttgatgactatcacaaattcgaacccagggtacctgtaggtgtttct
gggacagctttagcggcttcacttttgcgtgatggttggagtttggccaaaatgtatgcc
aagtaccaagagactgttgatgctttgcggcatgagcagatgggaaggaaagaagctgag
gcagttctgcagagggtgctatgtgaattagaggataaagcagaagtcattttagaggaa
agagcggaacatgagggaatgatcgagtcatattccttgttaaaccaaaaattgcagcat
tctatttctgaacaggcaattttggagaaatctgttcaagaattgaaggctgttttgaag
agacatgaacgtgattacatgttaattcagagagagaacgttgacctttcaagacaggtt
acaattcttctaaaggaatgtcgagacgtacaacttcgctgtggatctgctggacatgat
gttcttgagaatctttcaacagctacatcctttcaaatcaatgtggagtctgatgccgat
agagttatatctgaatatcttcagttaaccttcaaggacataaatggattagttgaacag
aatgtccagctgagaagcctcgtacgtaaactttctgtgcagcttcaagatacagagctt
gatttcaaggagaaactggaggctgaactgaaaagtaaaactcaagaagctgcatctaga
gttgaagcagtgttgcaaaaagttgaagagcagggacagatgattgagtcccttcatgcc
tccgttgccatgtacaaaaggctgtatgaagaggagcagaagcgtagtttgcctcactcc
cactctgctggagttgctctagcagatttttgtaggaaggaactcaagtttgtttctgaa
gattctcaggaagacacaaaggctgctctggaccaggcttctaaacgagtaagatctctc
gaggaagagcttgaaaaatctagaagcgagataaatttagtaagggctgaacgtaacaag
tttgaactcgagtcaggttttgccaaagaaaaactggctagtttcatgaaggaatttgaa
caacagagagtggaaatgaatggtgtgttggctcgcaatgtggagttctcgcaactctta
gtggactaccaaggaaaactgcggaaagtttcagaatccttgcacagtgctgatgaacag
tcccggaaattgagtattgaggtgtccatcttaaagtctgaaaaggagttgttatcaaat
gctgaaaagagagcacatgatgaaatacgaaatttatctgaaagattattccgcgtgcag
gcttctctggataccattcgaagtgttgaagaagttcatgaggaggctagggttgtagaa
aggaggaaactggaggaacatgctaagcaacttgagagggaatgggcagaggcaaagaaa
gagttgcaagaagaaagggacaatgttcgaactctcactcttgatcgtgagaagacttta
aagaatgcgatgagtcatgttgaggacatgggaaaggaactagcaaacgcactacatgcc
actgctgctgctgaggcgagagctgccgtcgctgaggccaaactgttcgatctggagaag
aaaattagttcttcagctaaccaggtcattgagctggatgataggagtggacttaagtct
cacccttcaaatcaggttggcatagatttgcatagaacggaggcagagattaagaaattt
aaagaagaagcacaagcttgtaaagaacatatgctacagtacaagagcattgcacaggta
aatgaagaagctgtgaaacagatggaatgtgctcatgaatctttcaagattgaggctgag
aaaatgaagaaatctttggaagtcgaacttcttcagcttagagagagggttgctgaactt
gaaaatgaatctattttaaaatctcaagaaatagcttctgctgctagattgaaggaagag
gctattgcatcttccctggcagatgttagaaatctgaatgaagaaaatgctgcaaaaacg
tctaagattctggaaatggaaattcagatatcctatttaaaagaagacttggaaagggaa
cagcaaaaatggcgtactgctcaagctaattacgaaagacaggttattctccagtcagag
acgattcaggagctgacaaaaacatcacaagctttggcttctttacaagaggaagcagct
gagcttcgtaaattagctgatgcttacaaaacagaaaatgaagaactgaaggccaagtgg
gaaggtgggaaagtagcacttgaggattttaagaataaagctgacaaggcatacaatgaa
ctcaatgaacagaataaaattctgcatgctaaacttgaggcattccacattcgattggcg
gagaaagatcaaaagttggctggagtttcttccgaacttaatactgagatggttggggat
tctggtatgcagagtgtggttagttacctcagacggacaaaagaaattgctgaagtagag
atctccttgctaaagaaggacaagttgagattgcagtcacaattagaaagtgctcttaaa
gctgtggagagtgcacaaacttcacttaatgctgagcgtcaaagctcaaaagcattattg
ttaaccgaggaggaaattaaatctttgcaacttcaggttagggagatgaacttgcttcgt
gaaagcaatatccaactgcgagaagagaataagcacaattttgaggaatgccagaaacta
cgtgaagaatttagaaaggctaaaagtgaaacagagaactttgagagcatgctgaagatg
agacaagtggaggtggaagcctgcaaaatggagattgaatcgcagaaagtggagaaggct
catcttgaaagcagagtctctgagttgcttgaaaaatctaagaatatagattatgaagat
tataatcgtgtgaaggatgatgttcaaagaatgcagatggagctgaatgagaaagatgca
gaaattgcaaaaatcaaaatgcttatcactgaaagacaggaatcgatatctcaattggag
caagacctttctagttgcagatttgaactgaaggaaagggaaaagaaactgaatgatgtt
caacatattgaggccaatctgaggacagatatggagaaacagaagaaattcttttctcag
tttaagcgaaagcttgaaattgtctcaaaggaaaaggatgaattgggcaaagaaaatcaa
gctcttttgaggcagttggaagacattaaacaagtgaatgttttcgggaaaaggtccact
ggagattcaactggtgagcagaccatagaagaaaaggacactaaaattcagatacttgag
aaacatctggagcggctgagagaagaactaaaaagagagaaggaagatagtcgtacagag
aaaagcagacggttgaaaattgagaaggcaataaaggattcttatactatcgttgagcag
gaaaaatcaaagatcttaaatgatttggagaagcataagggaaacttgaagcaagcttct
gatgaacttgagaagcttagacaatctaaaagcaatctttcggaggatgctttacctcag
ccactttcagggattggcttggacgatcttgcttctacctacgttttagctgctgagaat
tttgagaagactgtgcagtcagttttgactgatcttggagctcagaatgctacttcagag
gtttctttggtcacagatgctttggtacaaagtagtacaggtcctgatgttcctctccaa
acgcctgatgttgcagtgcctgtggctcctgtaacaaccaactttcctgtcaaaatccta
gaagaacgggaaaagaaaggtcaattatccaaggcaaaagtagaaacgcgtaaagcaggg
cgaaagttggttcgacctcgtcttggaaaaccaggagggtctctgggtgatatagacatg
tcaacatcagaattaccaaacagtgaaagcaagcgtgcaacttctggaaaatcagaaact
gaaagtgaatctactacatcagcccatcagctggctcgcaagcgtgtagcgacagcttct
gaattgcatgaacatgcagttatccctggggagagcattactgaaatggcagctcctgtc
atgaagaaggctaaagggtcagataccttggctgatgacgttggtggaccatcttctacc
tctctggaaagtctcaaaactcagtcgcccttggaagaagttcctgatgtttgtgagttt
cctcatggttcaagtgaggatgcagctgatgttgaaaaagaggttgaaattgcaggggag
aaggctgataggccaaaagaactatcatctgatggatctatcagccatgaggagatacac
actgacaggatggatgaaaatctggataagcagattgtagcggtgtcagatgatgggtta
aaagatcaagctgaaccagacaactggcatctaacttcagagattggaagcgagagagag
gaaggtgaggtggcccctgaagttatggaactggagggtgccaataatgttgaaagcatt
gaaataggggacgatcatattgagccagttgcaacgcctgatgcctccccatctagagtt
gatgatgatgcgatggctgtcacagacatggagattggcgagataaactcccctgagatt
caaaatgaagaaaagaatgatgagggtgatgcagctgaggaaacttccgaaattttagat
aagccaactgatagtaaccagattgatatggagagtgatcaggctgttgaaaccacctca
gtagctaccgagaacgtttcgagtacgccgccagaaataaatgattcgaaacaaggtagc
cccattgttgctaaacggtcgtctcctgtcggtagtagcacgtctactacaataaatttg
caagagcgagccaaggaaagagctatgctgagacaggctggagttgtttcttcattggat
agacgccctgtgagaggattgcgtggccggggtggtcggatagagcgaggtggccgtggt
caacgatctggacggggaccacctggggaatcaggtaggagttaa
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integrated database retrieval system