Cucurbita maxima (winter squash): 111468476
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Entry
111468476 CDS
T05246
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
cmax03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111468476
03083 Polycomb repressive complex
111468476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111468476
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111468476
Histone modification proteins
HAT complexes
HATB complex
111468476
HDAC complexes
Sin3A-HDAC complex
111468476
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111468476
PRC2.2
111468476
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111468476
Heterochromatin formation proteins
Other heterochromatin formation proteins
111468476
Chromatin remodeling factors
NuRD complex
111468476
NuRF complex
111468476
NuRF complex (fruit fly)
111468476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
MIOS_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
111468476
NCBI-ProteinID:
XP_022969495
UniProt:
A0A6J1I028
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MAEEQAGGVDEVVEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPSAPFPHQANPSLAV
HKLVLGTHTSEDVPNYLMVADSILPVKASETRIDISRENPIMPKIEITQKIRVEGEVNRA
RCMPQNVQIVGAKTSGCEVYVFNCAKQGAKAQGAECDPDLRLRGHDKEGYGLSWSPFKEG
YLLSGSNDQKICLWDVSSMADKNVLDAMHVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWIVATASSDTTVGLFDLRKLAEPLHVLSS
HTEGVFQVEWDPNHETVLASSGDDRRLMVWDLNSIGSEQDGEAEDGPPELLFSHGGHKAK
ISDFSWNSHEPWVISSVAEDNSVQVWQMAKSIYR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaacaagccggcggtgtcgatgaggtggtggaggaattcgccatctggaag
aagaactctccctatctgtatgatcttctcatttcccactcgctggaatggccatctctc
accgtcgattgggttccatcggccccatttcctcaccaggccaacccatctctcgccgtc
cacaagcttgtcctcggaacccacacttcggaggacgtccccaattacctcatggtggcg
gattctattcttccggtcaaagcatccgaaaccagaatcgacattagtagggaaaatcct
attatgccgaagatagagataacccagaagatacgtgttgaaggggaggtgaatagagcg
cggtgcatgccgcagaacgtacaaattgttggtgcaaaaacgagtggatgtgaggtgtat
gtttttaattgtgctaaacaaggggccaaggctcagggagctgagtgcgaccctgatttg
agattgaggggtcatgataaggagggttatgggttatcttggagtccgtttaaggagggt
tacctcttgagtggctcaaatgatcagaaaatttgtttgtgggacgtgtcttccatggct
gacaagaatgtgcttgatgcaatgcacgtttatgaggctcatgaaagcgtggttggggat
gtgtcatggcatttgaagaatgagaatttgtttggatctgtaggcgatgattgcttgttg
gtgatatgggatttgcgcacaaataaatcagtggattctgttcgagctcacgaggaggag
gtgaactatgtttctttcaatccttataacgaatggattgtagcaacggcatcctcagat
accacagtgggtctgtttgatctccgaaaacttgccgaaccactgcacgttcttagcagc
catacggaaggagtgtttcaggtggagtgggatccaaatcatgagactgtgctggcatct
tctggtgacgatagaaggttaatggtgtgggatctaaacagcataggaagcgagcaagat
ggagaggctgaagatgggcctccagagctgttgttttcacatggaggtcacaaggctaaa
atatcagacttcagctggaacagccacgagccctgggtcatttcaagtgtggctgaagat
aactcagtacaggtctggcaaatggccaaaagtatctaccgatga
DBGET
integrated database retrieval system
