Cucurbita maxima (winter squash): 111468590
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Entry
111468590 CDS
T05246
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111468590
Membrane trafficking [BR:
cmax04131
]
Protein recycling
Others
EARP complex
111468590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
111468590
NCBI-ProteinID:
XP_022969612
UniProt:
A0A6J1HWS6
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MQPNLFPFGSVLGNPLTYNGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRS
ARSLGLLPTPTDRPEVQVPARAVAAAAVARALAGLPPHQRFSLPSSSEELSSIYGSRSHG
HEVEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATTRLAQLDKVAERLSRHVMEH
HEVMVKGMHLVRELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALLDMVP
VLSELRHAVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEVWLGR
TLQKLDLLLIDVCQEFKKEGYLTVIDAYALIGDVSGLSEKIQSFFMQEVISETHSSLKDI
VQEDQDVRVQNSRLTYSDLCLRIPESKFRQCLLKTLAVLFTLMCSYYQILSFQLDTKDSV
QQSPNMNQLEDNCDLNLGDTEESTTRIMNPVYVDGSDSNMESRTDSSTASTSGSPWYHLR
KDAISFVSQILQKGRKNLWQLSTSRVSVLLSSVAVCSTSIHQFLKNYEDLNVFILAGEAF
CGVEAVEFRQKFKIVCENYYGTFHKQSMHALKMVMEKENWLILPPETVQVVSFAGLIGDG
APLFVPSDGKSSNTKVRQSDKSASSVSTGRGRSGFLQWIKSGNPFLLKLMHTCKEDIPNG
AFYGELDGSAGGSSHRNSHSENTDNLENGGHAVSEGEDENEDLLADFIDEDSQLPSRISR
PKLPRNSSNHNFDEVSAQTGSSLCLLRFMDKYARLIQKLEIVNIEFFKGMCQLFELFFYF
VYETFGQPNTTSGGKGFPDSLNYKLKAALSRASQDCDQWIKSNSSSPSASNSTFSFNEVT
PSPPGSSFGYLHGTTFGLKERSAGADSLSLVARIMHRSKAHIQSMLLQTNATVIEDFYAH
LLDAVPYLIEHIHKNTARLLLHVNGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKT
RLVHSGVRNEVQNLLLEYGLDLVAETLIEGISRVKRCSDEGRALMSLDLQVLINGLQHFV
SANVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIIGLVNLVALMKGWKRKARLE
VLEKIE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatttgtttccatttggcagtgttcttggaaaccctttgacgtacaatggt
gatttgagcgaaggattcgagacgtccaggtttctcttctttgttccgttttttctgctg
caaggaggtggaatggacttgtctaaggttggggagaagattttgagctcggtgaggtca
gctagatcgcttggacttcttcctacccctactgatcgtccggaggtgcaggttcccgca
cgtgctgtggctgcggcagctgttgcccgtgcacttgctggattgcctcctcatcagaga
tttagtctcccatctagctctgaagaactgagctcaatatatggcagtagaagtcatggt
cacgaagtagaggaactagaggaagtattctatgaagaggattttgacccagttaggcat
gtgttagagcatgttccatcagaagaaaatgatctggaatatctggagaaacaggctaca
acgagattagctcaacttgataaagtggctgaacggttatctcgtcatgtaatggagcat
catgaagtgatggtgaaggggatgcatttggtcagggagttggaaaaagacttgaagatt
gcgaatgtcatctgcaggaatgggaagagacacctaacttcgtcaatgcttgaagtctct
agagatctcattgtaaactctaattcgaagaagaaacaagcacttctggacatggttcca
gttttgagtgagcttcgtcatgctgtggacatgcaatcaatgcttgagtctcttgttgaa
gagggaaattattacaaggcttttcaggttttatccgagtatttgcagctattggatagt
ttttcagagctttcagtcattcaagagatgagccgtggtgtagaggtttggcttggaaga
accctacaaaagttggatttacttttgatagatgtctgtcaggagttcaagaaggagggc
tatttaactgtgattgatgcttatgcactaataggagatgtgtctggcctttcggaaaag
atacaaagcttttttatgcaggaagttatatcagaaacccattcttccttgaaagacatt
gtgcaagaggatcaggatgtacgtgtacaaaatagtaggcttacatacagtgatctatgc
cttcgaatacctgaatcaaagtttaggcagtgtttgttaaaaacactagctgtcttattt
accttgatgtgttcatattatcaaatcttaagcttccaactggatacaaaggattcagtt
caacaatctcctaacatgaatcaactagaagataattgtgaccttaatttaggagataca
gaggaatcaacgacaagaattatgaatcctgtttacgtggatgggagtgattctaatatg
gagtcccggacagatagcagtacagcatcaaccagtggttctccctggtatcatctgaga
aaagatgctataagttttgtttcccaaatccttcaaaaaggccgtaagaacctctggcaa
ctatcaactagtcgtgtgtcagtactgctttcttctgttgctgtttgttctacgagcatt
catcaattcttgaaaaactacgaagatctcaatgtcttcatattggctggagaagccttc
tgtggagttgaagcagttgagtttaggcaaaagttcaagattgtttgtgaaaactattat
gggacttttcataagcagagtatgcacgctctaaagatggttatggaaaaagagaattgg
cttattctgccacccgaaacagttcaagttgttagttttgctggactgattggtgatgga
gcacctctatttgttccatctgatggtaagtcgtctaacaccaaggtccgacagtcagat
aagtcagcaagctcagtcagtacaggtcggggtagaagtggttttttgcagtggatcaaa
agtggaaatccatttttacttaaactaatgcatacttgtaaagaagacatacccaatggt
gccttttatggagaattggatggaagtgctggtggaagttctcataggaactctcactct
gagaatactgacaatcttgaaaatggtggtcatgctgtatctgaaggtgaagatgaaaat
gaagatcttttagctgactttattgatgaagatagtcaacttccaagcagaatttcaaga
cccaaacttccacgaaattcttctaaccataattttgatgaagtttcagctcaaacagga
tcatctctatgccttttaaggttcatggacaaatatgcaaggcttattcagaagctagag
atagtgaatattgagtttttcaagggtatgtgccagttgtttgaattgttcttctatttt
gtgtacgagacttttggccagcctaacactacttctggtggaaaaggcttccctgactcc
ctcaattataaattgaaggcagctttatcccgggcttcacaggattgtgatcagtggata
aaatctaattcatcttctccatcagcatcgaattcaacattttctttcaacgaagttacc
ccaagccctcctggcagtagcttcggttacttgcatggaacaacttttggtctcaaggag
aggagtgcaggtgctgactcattatcacttgtggcaagaataatgcataggtctaaagcc
catattcaatccatgcttctgcaaacaaatgcaactgtaattgaagacttttatgcacat
ctgttggatgccgtcccatatctcattgagcatattcataagaacactgcaagactgctt
cttcatgtcaatggttatgttgatcggatagccaatgcaaaatgggaagttaaagagctt
ggactcgagcataatgggtacgttgacttgttattgggagaattcaagcattataaaaca
aggctggtccatagtggagttcgcaatgaggttcaaaacctcctcttggagtatggactg
gatcttgtcgctgaaactcttatcgaaggtatatcacgagtaaagagatgttcagatgaa
gggcgcgctctcatgtcattggatcttcaggttttaatcaatggcttgcaacattttgtt
tctgcgaacgtcaagcctaagttacaaatggttgaaacgttcattaaggcatactatctt
ccagaaaccgaatatgtacactgggcacgtgctcacccggaatacagtaagagccaaatt
attggtttggttaacctggtggcattgatgaaagggtggaagagaaaagcccggttggaa
gtattggagaagattgagtga
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