Cucurbita maxima (winter squash): 111469160
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Entry
111469160 CDS
T05246
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111469160
Enzymes [BR:
cmax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
111469160
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111469160
Prokaryotic type
111469160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
111469160
NCBI-ProteinID:
XP_022970191
UniProt:
A0A6J1HZY3
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MISKKRFKSLSSCSRVGILKGEAEHTIPNFIRECGASLLVTDFSPLREVRKCKEEICKRV
DESVKVHEVDAHNVVPIWIASEKLEYSAKTLRGKINKKLPEYLIDFPALLIPTRKWPSTD
KFIDWDRLIEDNLRKGADVPEIEWCKPGEKAAMEVLMGSKDGFLTKRLKSYAIDRNNPLK
PRGLSGLSPYLHFGQISAQRCALEARNVRKLNPQAVDMFLEELIVRRELADNYCYYQPHY
DSLLGAWEWARKTLMDHASDKREHVYTREQLEKAQTADPLWNASQLEMVFHGKMHGFMRM
YWAKKILEWTRGPEEALEICIYLNDKYEIDGRDPNGYVGCMWSICGVHDQGWKERPIFGK
IRYMNFAGCKRKFDVDGYIAYVKRVVGEMKKRKAEEVVVDRKAKESRC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgaagaaacgcttcaaatccctctcttcttgttccagggttggcattcttaag
ggggaagcagaacatactataccaaatttcattagagaatgtggggcttcgcttctggtt
acagacttctcgccgttacgagaagttcggaagtgtaaagaggaaatttgtaagagggta
gatgaatcagttaaagttcatgaagttgatgcccacaatgtggtacccatttggattgcg
tctgagaaattggagtatagtgcaaaaactttaaggggcaagataaataaaaagctcccg
gaataccttattgatttccctgctctgcttataccaactaggaaatggccttccactgat
aagtttattgattgggacagacttattgaagataacttgagaaaaggagcagatgttcct
gaaattgaatggtgtaaaccaggggaaaaggctgcaatggaagtattgatgggcagtaaa
gatgggtttttgactaagaggttgaagagctatgcaatagatagaaacaatccattgaaa
cctagggggctctctggcctctccccatatttgcattttggtcaaatatccgcacaacgc
tgtgccttagaagctcgtaatgttcgaaaactcaatccacaggccgttgatatgtttctc
gaggagttgattgttagaagggaacttgctgataattactgctactaccaaccgcactat
gattcactgctcggggcttgggaatgggcacgtaaaaccttgatggatcatgcttccgat
aagcgagaacacgtttacacgagggagcaactggagaaggcgcagactgctgacccactc
tggaatgcttctcagttggagatggtcttccatggaaagatgcatggttttatgaggatg
tactgggccaaaaagattttggagtggacaagaggacctgaggaagccctggaaatttgc
atatacttgaatgacaagtatgaaatcgatgggagggatccaaatggatatgtcgggtgc
atgtggtcgatctgtggcgttcacgaccagggctggaaagagcgacctatatttgggaag
atacggtacatgaacttcgctgggtgcaagaggaaattcgatgtggatggctacatagct
tatgtgaagagagttgtgggtgaaatgaagaaaagaaaagcagaggaggttgtggtggac
agaaaggcaaaggaaagccgttgctag
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