Cucurbita maxima (winter squash): 111469296
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Entry
111469296 CDS
T05246
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111469296
Membrane trafficking [BR:
cmax04131
]
Protein recycling
Others
EARP complex
111469296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
111469296
NCBI-ProteinID:
XP_022970284
UniProt:
A0A6J1I532
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MQPNLFPFGSVLGNPLAFEGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRS
ARSLGLLHTTSDRPEVPARAVAAAAVARALAVLPPHQRFGLSSSSEELSSIYGSRIHGQE
VEDLEDVFYEEDFDPVRHILEHVPSEESDLEYLEKQATKRLAQLDKVAERLSRHLMEHHE
VMVKGMHLFRELEKDLKIANVICRNGKRHLNSSMLAVSRDLIVNSNSKKKQALLDMLPIL
SELRHAVDMQSMLEILVEEGNYSKAFQVLSEYLQLLDSFSELSVIREMSCGIETWLGRTL
QKLDSLLIEVCQEFKKEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSSLKGIVQ
EDQDVHIQNSRLTYSDLCFQIPESKFRLCLLKTLAVLFTLVCSYYQIFSFQLDTKDSIDQ
TPNMKQQEDNSDINLGDTPESTINVSSMGTAADTNFVYMDRSDLNRGSPTDSSTASTSGS
PWYHLRKDAINFVSQTLQRSRKNLWQLSTSRVSVLLSSAAVCSTSIHQFLKNYEDLNVFI
LAGEAFCGVEAVEFRQKLKIVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFP
GLVGDGAPLFVHSDGNSSKGKVPRSDKTTSSVSTGMDRSGFLRWLKNGNPFLLKQMHTCK
EGIPNGALYGELDGSAGEGFHRSNSSPMKYTDKLSNGANTVSEDENEDLLADFIDEDSQL
PSRILKPRLSLNHSSNHNNDEITAQTGSSLCLLRSMDKYATLMQKLEIVNVEFFKGMCQL
FEVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSASNST
FAFNEVTPSPPGNSLGYFHGTSLGLKERCAGADSLSLVARIMHRSKAHIQSMLLQTNVAV
IEDFYVYLLDAVPYLIEHIHKNTARLLLHVNGYVDRIANAKWEVKELGLEHNGYVDLLLG
EFKHYKTRLAHSGVRKEVQDLLLEYGLDIVAETLIEGISRIKRCSDEGRALMSLDLQVLI
NGLQHFVSANVKPKLQMVETFIKAYYLPETEYVHWTRAHPEYSKSQVIGLVNLVASMKGW
KRKTRLEILEKIE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatctgtttccatttggcagtgttctcggaaaccctttggcgttcgagggt
gatttgagcgaaggattcgagacttccaggtttctgttctttgttccgttttttctgctg
caaggaggtggaatggacttgtccaaggttggggagaagattttgagctcggtgaggtcg
gctagatcgcttggacttcttcataccacttcggatcgtccggaggttccggcacgtgct
gtggctgcggcagctgttgctcgtgcacttgcagtattgcctcctcaccagagatttggt
ctctcatctagctcggaagaactgagctcaatatatggcagtagaattcatggtcaagaa
gtagaggacctagaggatgttttctatgaagaggactttgatccggttaggcatatatta
gagcatgttccctcagaagaaagtgatctggaatatttggagaaacaggctaccaagaga
ttggctcaacttgataaagtggctgaacgtttgtctcgccatttgatggagcatcatgaa
gtgatggtgaaggggatgcatttgttcagggagttggaaaaagacttgaaaattgcgaac
gtcatctgcagaaatgggaagagacacctaaattcgtcaatgcttgcagtctctagagat
ctcatagtaaactctaactccaagaagaaacaagcacttctggatatgcttccaattttg
agtgagcttcgtcatgctgtggacatgcaatcgatgctcgagatccttgttgaagaggga
aattattccaaggcttttcaggtcttatctgagtatttgcagctattggatagtttttca
gagctttcagtaattcgagagatgagctgtggcattgagacttggcttggaagaacgcta
caaaagttggattcacttttgatagaagtctgtcaggagttcaagaaagaggcttattta
accgtggttgatgcctatgcgctaataggagatgtctctggccttgctgaaaagatacaa
agcttttttatgcaggaagttatatcagaaacccattcttccttgaaaggcattgtgcaa
gaggatcaggatgtacatatacaaaatagtaggcttacatacagcgatctatgctttcag
attcctgaatcaaagtttaggctgtgtttactaaaaacactagctgtcttatttaccttg
gtgtgctcatattatcagatctttagcttccaactggataccaaggactcaattgaccaa
actcctaacatgaagcaacaagaagataattctgacattaatttaggagatacacctgag
tcaacgatcaatgtctcttcaatggggactgcagcggatacgaattttgtttacatggat
cggagtgatctcaatagagggtccccgacagatagcagcacagcatcaaccagtggttct
ccctggtaccatctgagaaaagatgctataaattttgtttcccaaaccctacaaagaagc
cgtaagaacctttggcaactatctactagccgtgtctcagtactgctttcttctgctgct
gtttgttcaacgagcattcatcaattcttgaaaaactacgaagatctcaacgtcttcata
ttggctggagaagccttctgtggagttgaagcagttgaatttaggcaaaagttgaagatt
gtttgtgaaaactattatgtggctttccataagcagagtatgcacgctctaaagatggtt
atggaaaaagagaattggcttacactgccaccagatacagttcaagttgttagttttcct
ggactggttggtgatggagcacctttatttgttcactctgatggtaactcatctaagggc
aaggtcccacgttcagacaaaacaacaagttcagtcagtacaggcatggatagaagtggt
tttttgcggtggctcaaaaatggaaatccatttttacttaaacaaatgcatacatgtaag
gaaggcataccaaatggtgccctttatggagaactggatggaagtgcaggtgaaggtttt
cataggagtaattcctctccaatgaagtatacggacaaactttcaaatggtgctaatact
gtttctgaagatgaaaatgaagatcttttagccgactttattgatgaagatagtcaactc
ccaagcagaattttgaaacccagactttcactaaaccactcttctaaccataataatgat
gaaattacagcacaaacaggatcatctctatgccttttaaggtccatggacaagtatgca
acgcttatgcagaaactagagatagtgaatgttgagtttttcaagggaatgtgccagttg
tttgaagtgttcttctattttgtatacgagacttttggccagcttaacactacttctggt
ggaaaagggttcccggactctctcaattataagttgaagacagctttgtcacgagctgcg
caggattgtgatcagtggataagaccccattcgtcttccccatcagcttcaaattcgacg
tttgctttcaatgaagttaccccaagccctcctggcaatagcttaggttactttcatgga
acatctcttggtctcaaggaaaggtgtgcaggtgctgactcattatcccttgtggcaaga
ataatgcataggtctaaagctcatattcagtccatgctcctgcaaactaacgtggccgta
attgaagacttttacgtatatctgttggatgccgttccatatctcattgagcatattcat
aagaacactgcaagactgcttcttcatgtcaatggttatgttgaccggatagccaatgca
aaatgggaagtaaaagagcttggactggagcataatgggtacgtcgacttgttattggga
gaattcaagcattataaaacaaggctggctcatagcggagttcgcaaggaggttcaagac
ctcctcttggagtatggtttggatattgttgcagaaacacttattgaaggtatatcacga
ataaagcgatgttccgatgaaggacgcgctctgatgtcattggatcttcaggttttaatc
aatggcttgcaacattttgtttctgcgaatgtgaagcctaagttacaaatggttgagact
ttcattaaggcgtactaccttccagaaaccgaatacgtacactggacacgagctcacccg
gaatacagtaagagccaagttattggtttggttaacctcgttgcatcaatgaaagggtgg
aagagaaaaacccggttggaaatactggaaaagatcgagtga
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integrated database retrieval system
