Cucurbita maxima (winter squash): 111469467
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Entry
111469467 CDS
T05246
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111469467
03015 mRNA surveillance pathway
111469467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111469467
03041 Spliceosome [BR:
cmax03041
]
111469467
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111469467
Spliceosome [BR:
cmax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111469467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
AnfO_nitrog
Motif
Other DBs
NCBI-GeneID:
111469467
NCBI-ProteinID:
XP_022970510
UniProt:
A0A6J1I323
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MSGGFFRGTTADQDTRFSNKQAKLLKSQKFPAELDQLVDTTKVKMDIIKPWIATRATELL
GFEDEVLINFIYGLLDSKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQTNASGVPQ
QFLDAKEVEIRKKKAETDFLANEIQKKREKENKEMEEQRSKNMDDGAEKVADFVLESMSM
NRSTAMRNHSEDEEEAEKSNGVRGRSSDGHKSRSISRSPQQLRDSFSQGRLSISPCRRDH
RGSSSPRHRSSDSRRSRSTSHRKSLSPVVHQLQSPSQHSSPSPRCKSPYQLSSSGQSRSS
SPAQRRSPSLDKHSRSPSPTEHHRSLSPIRHNRLPSPAQHRRSPSPEWRRRSPSPEWRRR
SPSPKWSRRSPSPKWRRRSPSPKWSHRSPSPEWRRRSPSPEWRRRSPSPEWRRRSPSPKW
SRWSPSPRRRRRSPSPRRRRRSPSPRRRRRSPSPRRRHRSPSPVRCRRSPTPIRRRRSPT
PVRRRRSPTPVRRRRSPSPIRSQRSTSSPRHYRSPSPHRRKSPSLVRRHRSPSPAHYWRS
PSPIKRHPSRSPRQCSMLPSSSPIQKLDRPSPHDHHITPSPLERRSPSSPARLKRSSLSQ
HRSISPYGLSYSSKERGNRSPVKVKSPRVRTSDEKSYSRRGKAKEAEARIVENNNNRGEV
SDSDMEEGYKRKTRSKGRKRHRRSDRSDTSSERRHRRSDRRDTSSESEDSYDSELERKEA
RRRKEEERRWRKEKKRQRREEHGRKKEKRRAEKTNAKTLSDDCSDDGRAVREECRPSDGA
YEAEQRRLEVELRNKALEAFIARKGRRHNKPSE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgggtttttccggggtacgactgcggaccaagacactcgtttttcaaacaag
caagcaaagctgctgaagtcacagaagttccctgctgaactagaccaactggttgatacg
acaaaggtgaagatggacattatcaagccgtggattgctacgagggcgacggagcttctt
gggtttgaagatgaagttcttattaacttcatatatggccttttggatagcaaggaagta
aatgggaaggaagttcaaatacaactcactgggttcatggaaaagaatactgtgaagttc
atgaaagagctttggacactacttctaagtgcccagacgaatgccagtggtgtacctcaa
caatttttggatgccaaggaagtagaaattaggaagaagaaggcagagacagattttctt
gcaaatgaaattcagaaaaagagagagaaggaaaataaagaaatggaggagcagagatca
aagaatatggacgatggggctgaaaaggtggccgattttgtattggagtctatgtcaatg
aatcgttcaacggctatgagaaatcattcagaggacgaggaagaggctgaaaagagtaat
ggtgttaggggaagaagcagtgatggacacaagtcaaggagtatatctcgatcacctcaa
cagctacgagactccttttcacaaggaagattatctattagcccatgtcgtagggaccat
cgtggttcatcctctcctcgacatagatcatctgattcaagaaggtctagatctacttca
catcgtaaatctctttctccagtagtgcatcagttgcagtctccttctcaacatagttca
ccatctcctcgttgtaaatcaccatatcaactatcttcgtctgggcaaagtcgatcatcg
tcacctgcacaacgaaggtcaccatcacttgataagcatagtagatcaccatcacccact
gagcatcacaggtcactatcaccaattagacacaatcgtttgccttcacctgctcaacat
cgtagatcaccatctcctgaatggcgtcgtagatcaccatctcctgaatggcgtcgtaga
tcaccatctcctaaatggagtcgtagatcaccatctcctaaatggcgtcgtagatcacca
tcaccaaaatggagtcatagatcaccatctcctgaatggcgtcgtagatcaccatctcct
gaatggcgtcgtagatcaccatctcctgaatggcgtcgtagatcaccatcaccaaaatgg
agtcgttggtcaccatcaccaagacgacgtcgtaggtctccatcaccaagacgacgtcgt
aggtctccatcaccaagacgacgtcgtaggtctccatcaccaagacggcgtcacaggtct
ccatcacctgtacgatgccgaaggtcaccaactcctatacgacgtcgaaggtcaccaact
ccggtacgacgtcgaaggtcaccaactccggtacgacgtcgaaggtcaccatctccaata
cgaagtcaaaggtcaacatcgtcgccgcgtcattacaggtcaccatctccacaccgtcgg
aaatcaccttcccttgtacgtcgtcatagatcgccatctccagcacactactggagatcg
ccctcacctattaaacgccacccatctcgttctccaaggcaatgctctatgttaccttca
tcctcaccaatacagaaattggataggccatcaccacatgatcatcacataacaccctct
cctctagaacgtagatctccatcatctccagcacgtctcaagagatcgagcctttctcaa
catagatccatttcaccatatggtctgagttattcatcaaaggagcggggaaaccgatcg
cctgtcaaagtaaaatctcccagggtcagaaccagtgatgaaaagagctactcacgccga
ggtaaagccaaggaagctgaggctcggattgtcgaaaataataataaccgtggcgaggtc
tcagattctgatatggaggaaggctataagcgtaaaaccagaagtaagggtaggaaaaga
cacagaagatcagacaggagtgacacttcttcggagagaagacacagaagatcagacagg
cgcgacacttcttcggagtcggaagacagctatgatagtgaattggagaggaaggaggcc
aggagaaggaaggaggaggagaggaggtggcggaaggagaagaagcgacaaagacgtgaa
gagcatggacgtaaaaaggaaaagcggcgtgctgagaagacgaacgctaagactctcagt
gatgattgctcggacgatggtcgagctgtaagggaagagtgtcgtccgagtgatggtgcg
tatgaggccgagcagagaaggttagaggtcgagttgaggaataaggcactggaagcattc
attgcaaggaaagggagaaggcataataaaccttcagaatag
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