KEGG   Cucurbita maxima (winter squash): 111469600
Entry
111469600         CDS       T05246                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b-like
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111469600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111469600
   03032 DNA replication proteins [BR:cmax03032]
    111469600
Spliceosome [BR:cmax03041]
 Complex A
  U1 snRNP components
   Sm proteins
    111469600
  U2 snRNP components
    111469600
 Complex B
  U1 snRNP components
    111469600
  U4/U6.U5 tri-snRNP components
    111469600
 Complex C
  U2 snRNP components
    111469600
DNA replication proteins [BR:cmax03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     111469600
SSDB
Motif
Pfam: LSM WHD_ArnR1 EBNA2_Core Gemin7 Gp138_C
Other DBs
NCBI-GeneID: 111469600
NCBI-ProteinID: XP_022970690
UniProt: A0A6J1I3K7
LinkDB
Position
Unknown
AA seq 114 aa
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNPITMDHLSV
RGNSIRYYILPDSLNLETLLVEETTRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq 345 nt   +upstreamnt  +downstreamnt
atgaagctcgttaggtttttaatgaaactcaataatgaaactgtctcaatcgagcttaaa
aatggaactgtggtccatggcaccatcacaggtgtggatattagcatgaatacacatttg
aaggctgtgaaacttaccctaaaggggaaaaatcccattaccatggatcatttaagtgtg
aggggtaacagcatcagatattatattctccctgacagcttgaatctcgagactttactt
gttgaagagacaaccagggtcaagcccaagaaaccaactgcagggaagcctttgggacgg
gggcgtggacgggggcgggggcgtggtcgggggcgaggtcgctag

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