Cucurbita maxima (winter squash): 111469634
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Entry
111469634 CDS
T05246
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111469634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111469634
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111469634
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111469634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
111469634
NCBI-ProteinID:
XP_022970735
UniProt:
A0A6J1I3Q4
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDE
ELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGL
DFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEF
EWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLH
EKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
KICDEYELSKKFKEFKVSC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggatagaattgttcaaggtccgagaggagataaccctttgattacagaagtttgggct
tacaatctcgatgatgaaatccttcggctcgaccattgtctgctattgtacccagttatg
tcaatcgatactgaatttcctgggtgtattaagagaactccttggggcacgattgatgaa
gaactctacgcagattttcgattcaatgtcaaccaaaccaaagtgattcaactaggtgtg
acagtttctgatgaatcagggaacatcggcggtacatgggagtttaatttctctgacttc
gatcctgaaatcgacgctcataaccctgcgtccatttgttttctgaaacagaacggcttg
gattttgggaaactgaaaaaagatggaattaaggtgagaaaatttgcaataagattctta
tatacgatgcgaaagcatgcgatacaccagtggattacatttcacggattatacgatatt
ggatatctgatattggcgttgggcgtggttaaaagcttgccggaaacattgggcgaattc
gaatggatcgtggcgaggagagtggggaccgtgagggatttaaagcatatggcgcgattc
tgcgaagggcttgaaggggggaatttaggactcgagaagttagggcaattgctggaccaa
aaacgctttggattgaagcatcacgctggttctgatagtttaatgactgtgctgcttcat
gagaagatgttgcaactgtatgatttcaatgcggaaatttgcgatgggtttttgtatggg
ctgtcgaagaaattcgaggagttcgtgggcatgcaatcacatcgcatatatgttcaaatt
aagtgtgcggaagtgaaagctatggtgattcgtaagaagatgttaaaacttttttatgcg
aaaatttgcgatgaatatgagctgtcgaagaaattcaaggagttcaaggtttcttgttag
DBGET
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