Cucurbita maxima (winter squash): 111469799
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Entry
111469799 CDS
T05246
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111469799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111469799
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111469799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
MsrA_helical
IF2_assoc
Motif
Other DBs
NCBI-GeneID:
111469799
NCBI-ProteinID:
XP_022970997
UniProt:
A0A6J1I0R5
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA
DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES
EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGQS
VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRFSNIGFESGNG
GNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNWSSSGISSQA
GGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSSTVLPPTSSFSTSVGFDGSLADFYSANY
SDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatagcggcaagttatttgttggtggaatatcttgggatactgatgaagaa
cgtcttaaagagtatttcagtgcctttggtgaggttgtagaagctgtgattatgaaggat
cggatcaccggtcgcggtcgtggcttcggctttattgtttttgttgatccaaatgttgca
gatagagttgtaagggagaagcataatattgatggaagaatggttgaggctaaaagggct
gttcccaggaatgaccagaacattgtaggtagaaccagtggtaccattaatgtttctcct
agtgctggacgaactaaaaagatatttgttgggggcttagcatcgactgttacagagagc
gaattcaagagctattttgatcaatttgggacaattacagatgttgtggtgatgtacgac
cacaatactcttcgacccagaggattcgggtttattacatatgattccgaagacgcagta
gataaggttcttatcaagactttccatgaactgaatggaaaaatggttgaagttaagcgt
gcagttccgaaagagttgtcaccaggtcctagccgtagtccacttggtggatacaattat
ggtcagagtagggtcaatagcttccttaatggttatactcaggggtacagttctagtaca
attggaagctatggtgttagaatggatggtagatttagtccggtttctagtggtcaaagt
gtattcactccattcggttcaggttatggaatgggagtgaactttgagattggtttaaac
ccggggtacggtggagcttccaattttgccaataatctcaactatgggcggggactgagc
ccgtattatactggtaattctgataggtttagcaacataggttttgaaagtggcaatgga
ggaaactcatccttcttcagctcagcaactcaaaacttgtggggaagtggagggctcaac
aatggttcaaactctgccaattccaatgctcatttgggatcagcaagcggcatcattgga
ggaaatgcatttgccaattctggagttaactggagtagttctggaatctcgtctcaagcg
ggaggaaatcatatttttagtaactccgggagtctaaattatggaggtgttgacagtggt
tatactcttggagctggagggtatgggaggaacagtagtactgttttgcctccaacgtca
tcattttctacctctgttggttttgacgggtccttggccgatttctacagtgctaattac
agcgatcccacgtggggaccttccaattttgaaagagatggatctggacccattggttat
ggacttggcaatgctgcttcagatgtctcatccagaagctctcctggtttcattggtggt
caaagcgttaataggaggcagtcgagcagaggaaacactacctag
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