Cucurbita maxima (winter squash): 111470025
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Entry
111470025 CDS
T05246
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111470025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111470025
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
111470025
SWR1 complex
111470025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
111470025
NCBI-ProteinID:
XP_022971248
UniProt:
A0A6J1I6A5
LinkDB
All DBs
Position
Unknown
AA seq
2052 aa
AA seq
DB search
MASKGPRFKLDHETRAKRQKTQEAPREPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMIDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKLVLYKHQMELD
EKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPSPVDSTHEPHNVHLQEMDENKAVET
TELNVEHEADSVDFDEEFDVRSDDESEDNEQTIDEDEALITEEERQEELEALQNEVDLPL
EELLKRYAQEKDDLEVSPETSTAGTEETEVEENHERGNECSTSHKVDEMDSLSFAGRRCN
QSNGESSCVENHMKRETCRTKRPSMLPIEFPEDDAFYDFSEEREDDDYDVAGGEEKDDEA
TLSEEEKLEKVDSNNADDEILMLRNESEIPIEELLARYGKGPNNGYDSDYEDENASALSD
DLVDSSSYEEIEPKPLNVCVHENIDPGKSHSSASSPPERKGSLENSEERENEDRIFDAAA
AARSAQPTGNTFSTTKVRTKFPFLLKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLGK
TIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKR
QGWMKLNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKR
RILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVLDRL
HNVLRPFILRRLKRDVEKQLPKKYEHVLNCRLSRRQRHLYEDYIASSETQATLASGNFFS
MINVIMQLRKVCNHPDLFEGRPIISSFDMAGIVMQLSSSVCSALSPDLFSRVDLKGLGFL
FTHLDFSMTSWERDEVRAIATPSNLIKCSTNVNKPEEIGSGFRYRKRLHGSSIFADIQNA
IMEERVRQAMERAEAIAWWNSLKCDKKPIYSASLRDLVTIRHPVYDIYHEKANPSSYCYS
SKIADIVLSPVERFQMMMGLVESFTFAIPAARAPPPLCWCSGSRSDVFMHPSYVQNCSRL
LFPLLTPIRSAIIRRQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLD
ILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTV
IFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDNLVIQS
GSYNTEFFQKLDPMELFSGHKSLAIKNMQKEKNHTISSNEVSVSNADVDAALKFVEDEAD
YMALKKLEEEEAVDNQEFTEEVIGRMEDDEFMNDDEIKLDEGGDQAGGIIMSNKDNEAII
HGANDLNEEKAVIVANKEDDVDMLADVKQMAAVAAATGQTISSIDVQLRPIDRYAIRFLE
LWDPLRDKAAMDSDVQFEETEWELDRLEKYKEEMEAEIDEDEEPLVYESWDADFATEAYR
QQVEVLAHHQLMEDLEYEAKRKEEEEAENCDPTRNATPSELKPKSKKKSKKAKFKSLKKG
SLFSELKSVKKEMSVEFMSTDDEDLCSEDVLESLSAQSSLQKKRKRGEFSLDSETGKSLK
KKSKKFKKNIADAFPLDLHLSESGVQYDEAIEIKPRETGADLEHKLVGRSRMGGKISITS
MPVKRVLMIKPEKIKKGNIWSRDCVPSPDFWLPQEDAILCAMVHEYGSHWSMISSTLFSM
TAGGFYRGRYRHPVHCCERYRELIQRYVISAPDNPNSEKTTNASSGKALLRITEEHIRVL
LDVAAEQPDSEYLLQKHFTALLSSVWKARIRGNRGFDTSLSRNGLYSGGRYFPTGNHITR
YLGRETTGKLKFGNTSHNCKLIAAALNDAGCTRTDDKTSLSYHGGRASVATEQLELTLEF
EGENDLNVSFPSSINLTVSDAVDLSPINLDAGESSGARRLTEVAEIRFRDAARTCNEDFH
GWASSVFPITDLKARSVPKSQSLGKHKVGGVADSSKSSKSKFRKAGPDHGESSHTIADPV
MYQMPSLIQEDVHNLYSLSSPILTDDSFPFVMDEYPFLQDEPGTLEIVPDNDYILGSISG
FDTIGPDFTDIG
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaggtcccaggtttaaacttgatcatgagacaagagccaagcgtcaaaag
acacaggaagctccaagagaacctaatcgacctaaaacacattgggatcatgttttagaa
gagatggtttggctttcgaaggactttgagtctgagcggaaatggaaattagctcaggca
aaaaaggttgctctaagagctagcaaaggcatgatagatcaagctacacgggaagaaagg
aagttgaaggaagaagagcagcggttgagaaaacttgctctcaatatttcaaaggatgta
aagaagttctggatgaaaatagaaaagctggtgctttacaagcatcagatggagcttgat
gagaaaaagaaaaaggcacttgacaaacacctcgagtttcttttagggcaaacagaaagg
tactcaacaatgctggcagaaaatcttgtggaaacttataaaccatcgccggtggattct
acacatgagccacacaatgttcacttacaagaaatggatgaaaataaagctgttgaaacc
acagagttaaatgttgaacacgaggcagactctgtggactttgatgaagaatttgatgta
agatcagatgacgaatcagaagataacgagcagaccatagatgaagatgaggctctgata
actgaagaagaaaggcaagaagaactggaagccttgcaaaatgaagtggatcttcctctt
gaagagcttcttaaaagatatgcacaagagaaagatgatttagaagttagtcctgaaacg
agtacagcaggaaccgaagagacagaagtagaagaaaatcatgaaagagggaatgagtgt
tctacgtcgcataaggttgatgaaatggactcacttagttttgccggtcgtcgttgtaat
caaagcaatggggaatcatcttgtgtagaaaatcatatgaaaagagagacttgtcgaaca
aaacgtccatccatgctaccgatcgagtttcccgaggatgatgcattttatgatttcagt
gaagaacgtgaagatgatgattatgatgttgctggtggagaagaaaaggatgatgaagca
actttatcagaggaggagaaactggaaaaagttgattcaaacaatgccgatgatgagatt
ttaatgctgcgaaatgagagtgaaatacctatagaagaactgcttgcaaggtatggaaag
ggtcccaacaatggttatgattcagattatgaagatgaaaatgcttctgctttgtcagac
gaccttgtggattcttcatcttatgaagaaattgagccaaagcccctcaatgtctgtgtg
catgaaaatattgaccccggtaaatctcattcatctgcaagttcacctccggagaggaaa
ggatcattagaaaactctgaagaaagggagaatgaggacagaatttttgatgctgcagca
gcagcacgatctgcacaacctactgggaacacattttccacaactaaagtgcgtacaaaa
ttccctttccttcttaagcactccctacgtgaatatcaacatattggcttggattggctt
gtgaccatgtatgagaaaagactaaatgggattcttgctgacgaaatggggcttgggaag
acaatcatgaccattgctttgcttgctcatcttgcttgtgaaaagggaatatggggtccc
catcttattgtggtcccaacaagtgtcatgcttaattgggagactgaatttctcaagtgg
tgtcctgcttttaaaattttaacttactttggaagtgcaaaagagcgcaagtttaagagg
caagggtggatgaaactgaactcatttcatgtatgcataacgacttacaggttggttatc
caggattctaaagttttcaaacgcaagaagtggaagtatctaatactagatgaagctcat
ctaattaagaattggaagtcacaaagatggcaaactcttttgaacttcaattccaagcga
cgaattttattaactggtaccccgcttcaaaatgatctgatggagctctggtccttgatg
cactttttgatgccccatatttttcagtctcatcaagaattcaaggattggttttgcaat
ccaatttcaggaatggtggaggggcaagaaaaagtgaataaggaagttcttgatcgtctg
cataatgttctccgcccctttatacttcgtaggctgaaaagagatgtagagaagcagctc
ccaaagaaatatgagcatgttttgaactgtagattgtctagaaggcagcgtcatttatat
gaggactatattgctagttctgaaacacaagctactcttgccagtggcaatttctttagt
atgattaacgttattatgcagcttaggaaagtttgtaatcatcctgatttgtttgagggt
cgtccaatcatcagttcttttgatatggcgggtatagtcatgcagttgagttcatctgta
tgttctgcattatcacctgacctattttctagagttgaccttaagggtttaggattttta
ttcactcatctagactttagcatgacttcatgggagagagatgaagttagagctattgct
accccatcaaatttaattaagtgctctaccaatgtgaataaacctgaggaaattggatct
ggatttagatatcggaagagattgcatggatcaagtatttttgcagacattcaaaatgca
attatggaggaaagagtaaggcaggcaatggaacgagcagaagctatagcttggtggaat
tccttgaaatgtgacaaaaagccaatttattcggcatccctcagggatttagtgacgata
aggcatccggtttatgatatataccatgagaaggcgaacccttcatcctattgttattcc
tcaaaaattgctgacattgtcctttcaccagtggaacgtttccagatgatgatgggctta
gttgaaagcttcacctttgcaataccagcagcacgggcccctccacctttgtgctggtgc
agtggaagccgttctgatgtgtttatgcatccttcttatgtgcaaaactgctcccgactc
ctgtttccccttctaactccaatcagatctgcaattattcggaggcaagtgtattttcca
gacaggaggctgatacaatttgactgtggaaaattgcaggaacttgctattctactcagg
aaactaaaatctgaaggtcaccgtgcattaatattcacccaaatgacaaagatgcttgat
atcttggaggctttcatcaatctgtacggttacacttacatgcgtctggatggatccact
cagcctgaggagagacagacattaatgcaaagatttaacaccaacccaaaatttttcctt
ttcattttatcgactcgtagtgggggtgtaggtattaatcttgttggtgcggatactgtt
atcttttacgatagtgattggaaccctgctatggatcaacaagctcaagatcgctgtcac
cgcataggacagacgcgtgaagtccatatatatcgcctgattagtgagagtaccatagaa
gagaatattttgaagaaggcaaatcagaagcgtgctcttgataatcttgttattcaaagt
ggtagttacaacactgaattcttccagaagcttgatcctatggagttgttctctggtcac
aagtctcttgccattaaaaatatgcagaaagaaaaaaatcataccatcagttcaaatgaa
gtttctgtatctaatgcggatgtggacgctgctttaaagtttgttgaagatgaagctgat
tatatggctttgaagaaacttgaagaagaagaagctgtggataatcaggaatttacagaa
gaggttattgggaggatggaagatgatgagtttatgaatgacgatgaaattaagcttgat
gaaggtggagatcaggctggtggcattattatgtcaaataaagataatgaggcaataata
catggagctaatgatcttaatgaagagaaggctgtaattgtagctaacaaagaagatgat
gttgacatgctggcagacgtcaagcaaatggctgctgtagctgctgcaactggacaaacc
atctcgtccattgatgttcagctacggccaatagatcggtatgcaatacgttttctggaa
ctgtgggaccctttacgtgataaagcagctatggactctgatgtccagtttgaggagaca
gaatgggaactcgaccgtcttgagaagtataaagaggagatggaagccgagattgatgaa
gatgaagagcctcttgtatatgaaagttgggatgctgattttgcaactgaagcatataga
cagcaagtcgaggtcttggcacaccatcagttgatggaggatttggaatatgaagctaag
cggaaagaagaagaagaggctgaaaattgtgatcctacaaggaatgcaacacctagtgaa
ctaaaaccgaagtctaaaaagaaatcaaagaaagccaagttcaaatctctaaagaagggt
tctcttttttctgagctgaaatcagtgaaaaaagaaatgtccgtggaattcatgtctaca
gatgatgaagatttatgtagtgaagatgttcttgaatctttatcagctcagtcaagctta
cagaaaaaacgtaaaaggggtgagtttagtctggacagtgagacaggaaagtccctgaag
aagaaatctaaaaagttcaagaaaaatattgcggatgctttcccattagatctccatctc
agtgagtcaggagtgcaatatgatgaagctatagaaataaaaccacgggagactggtgcg
gatctcgaacataaattagttggtcgtagtagaatgggaggaaaaatatctattacttcc
atgccagtaaagcgagttctaatgataaagccagagaaaataaagaaggggaacatttgg
tcaagggactgtgttccttcccctgacttttggttgccacaagaggatgctatattgtgc
gcgatggtacatgaatatggttcgcattggagcatgattagttcaaccttattcagtatg
actgctggtgggttttatagagggagataccgacatcctgtccattgttgtgagaggtat
agggaactcatacaaaggtatgttatatctgcaccagataatccgaatagtgagaagacc
acaaatgctagctctggaaaagctcttctcagaatcacagaggaacatattcgagtactg
ttagacgtcgctgctgagcagcctgatagtgagtacctacttcagaaacatttcactgcc
ctgctctcatctgtgtggaaggcaagaatacgtgggaaccgtggtttcgatacttcactt
tctagaaatggtctctattctggtggaaggtattttccaactggtaaccatattactcgg
tatttggggagggagaccacagggaagttgaaatttggcaacacaagccacaattgtaag
ttaatagctgctgcacttaatgatgctggttgtacgaggaccgatgataaaacgtccctt
tcctatcatgggggacgtgcatcagtcgctacagaacagttggagctaacactcgagttc
gagggagagaatgatcttaacgtgtcattcccatcctcaattaacttaacggtatcggat
gcagttgacttgtccccgatcaacctggatgctggtgagtcttctggtgctcgaaggcta
acagaagttgcagagattcgtttcagggatgctgctagaacttgtaatgaagatttccac
gggtgggcttcatctgtattccccataaccgatctcaaggctcgctctgtgccaaaatca
cagtcacttggaaagcataaggtgggaggagtcgctgactcttccaagtccagtaaatcc
aagttcagaaaggcaggacctgaccacggggagagttcccacacgatagctgacccagtg
atgtaccagatgccatctcttatccaggaggacgtccataacttatattccctcagctca
ccaattcttacagacgattcattcccatttgtcatggatgagtatccattcctacaagac
gaaccagggactctagagattgtccctgacaacgactacatcctgggatcgatttcaggt
ttcgacacgataggccccgacttcacggatattggttag
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integrated database retrieval system
