Cucurbita maxima (winter squash): 111470127
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Entry
111470127 CDS
T05246
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111470127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111470127
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111470127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
DUF1409
Motif
Other DBs
NCBI-GeneID:
111470127
NCBI-ProteinID:
XP_022971390
UniProt:
A0A6J1I5L5
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MGMIKPLPKSVRSSVRAGVILYDATKVVEELVYNSLDAGASKISIFIGIGTSYVKVVDNG
SGITRDGLALLGERYATSKFHDLIDMDTKGKTFGFRGEALASISDVSLVEIITKACGRAN
GYRKVIKGCKCLYLGIDDDMEDVGTTVIVRDLFYNQPVRRKHMQFSPKKVLQAVKKCVVR
TSLVHSKVSFKIVDSESESILLYTNPSPSPLSLLRSGFGSEISRSLRELKIGDGDLKLSG
YICSPFDTFTIKAVQYVYINRRFICKGQIHKLLNQLASRFVSLSPQTDQVCHSRKRSRFQ
ANPAYILNLDCPGSFYDLTFESSKTFVQFKDWASILTFIEETIQQFWKEKYSSGKSLVHT
TPIVGGDQLWKDEDNIISTNSDFREDVILFPPESIRSVKKSRMRSPQASLIDLFSPSAML
TKDDDILSNSLHEKKACENSHTSSSELNDVHQQARMQFGNQAADHFSGLWGTPLAKCSTT
AVQNGDRHPWVPDNIFVSEDSFLDRRLAFPKRCDDIVEDNIFSSDLKGQSSEVYIDMING
SAESTPSSYFHEFSYDDNIFTGNKPSLRGCTSGSSFQLESTSILGDKLYIQNDVIKRIQK
QGIPDDEVDVLKLDGYIQGSGFYAGDSLHAEFAEENIYSCHLDKHVQKFFSSYQTRNSPD
VHVTPNPRLASEWDVDCFSVRDGVERNWRSRDRTPFRDLVDCEDKGCGFDSDIMLRSSKK
NYIPSCIDSKLIIDDVLDIREDLSTSLEKSNNFEHSSPVSPNMHSCQKYLSNWRLPGRDW
EKAYGSSELKFGHKAFKQKYVSVERRRRCKSAPPSYKRKTSFYCLYQRKEEKHNAAGFYG
LDQRKTDKFNATNFYCMDQGKDEKLRASAFLDSPPHLELGQLRDSKHFSGTNNLYINPSP
LDDLSMGTRTDMTKMPTITGNNKEKQEGKVSKQFQSDVKVTASALELCSKETQESYLWIK
WKNCCPTTRNDGPRAFEDEVSILDISSGFLSLARNSLVPKSIDKNFLEDAKVLLQLDKKF
IPVVSGGILAVIDQHAADERIRLEDLRQKLLSGEAKTIAYLEDEHELVLPEIGYQLLYNY
SDQVKEWGWICNIHAQDSKCFQRNLNILYKQETVITLMAVPCILGVNLSDADLLEFLDQL
ADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTT
VPLVNLEALHKQIREMEILDKNGLNGTWHGLRRHELSIERMLQHVGSA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggggatgatcaagcccttgccaaagtctgttcgtagttctgtgcgtgctggcgttata
ctctatgatgccacgaaggttgtggaagagcttgtttataatagcttggatgctggtgcg
tcaaagatttcaattttcattggcattgggacatcctatgtcaaagtagtggacaatgga
tctggtattactcgggatgggttagccctgctaggagaaagatatgcaacttcgaaattc
catgatctcatagacatggataccaaaggcaaaacatttggctttcgaggagaggcattg
gcttccatttcagatgtatcgttggtggagatcataaccaaagcatgtgggagggcaaat
ggatatcgtaaagtcataaagggttgcaagtgcctgtatcttggaattgatgatgatatg
gaagatgttggtactacagttattgttcgagatctattttacaaccaaccagttcgaagg
aagcatatgcaattcagccccaagaaggtcttgcaagcagtcaagaaatgtgtagtccgt
acttcccttgtgcattctaaagtttccttcaaaattgtagatagtgaaagtgagagcatc
cttctttacacgaatccctctccttctcctttatcacttttgagaagtggctttggcagc
gagatttccaggtctctccgtgaattaaaaatcggtgatggggacttaaagctttctggt
tatatatgcagtccgtttgatacgtttactatcaaggctgttcaatatgtctatattaac
agacgattcatttgcaagggccaaattcataaattacttaatcaactggccagtagattt
gtaagcctgagtccgcagactgatcaagtctgtcacagcaggaagagaagcaggtttcaa
gcaaatcctgcttatattttaaatttagattgccctggatctttctatgacctaacattt
gaatcatccaagacctttgttcagtttaaggactgggcttcaatacttaccttcattgaa
gagaccattcaacaattttggaaagaaaaatatagtagtggaaaatctttggtccataca
acccccatagttggaggagatcagctgtggaaggatgaagataacataatatcaacaaat
tcagattttcgtgaggatgttatacttttccctccagagagtattcgatctgtgaaaaag
agcagaatgcgaagccctcaggcttcccttattgatttgttttctccgtcagcaatgctt
acaaaagatgatgacatcttgtccaatagtttgcatgaaaagaaggcatgtgagaattca
cacacaagttcaagtgaattgaatgacgttcaccaacaagctaggatgcaatttggtaac
caagccgccgatcatttctcaggattatggggtactcccttggcaaaatgctcaactaca
gctgtccaaaatggtgacaggcatccatgggtacctgataacatttttgtatctgaagac
tcctttctggatagaaggctggcttttccgaagaggtgtgatgacattgttgaggacaat
atcttcagttcagacttgaaaggtcagtcttctgaagtgtatatcgatatgatcaatggg
tctgctgaaagtacaccatcttcttactttcatgaatttagttatgatgacaatatcttc
acaggtaacaaaccctcccttcggggatgcacctcaggaagcagttttcaacttgagagt
acttccattcttggtgacaaactgtacattcaaaatgatgtcatcaaaagaatccaaaag
cagggaatccctgatgatgaagttgatgttctaaagcttgacggttacatccagggttct
ggtttttatgccggagactcactgcatgctgagtttgctgaagaaaatatatactcatgt
catttggacaagcacgtgcagaagtttttctcaagttatcagactagaaattccccagat
gttcacgtgaccccaaatcccagattagcctcagaatgggatgttgattgcttcagtgtt
agggatggggttgaaaggaactggagatctagagataggactcccttcagggatttggtg
gattgtgaggataagggctgcggatttgattctgatatcatgttgagaagttccaaaaag
aattacataccaagctgtatagatagtaaactgataattgatgatgttcttgatataaga
gaagaccttagtacttcccttgaaaaatctaataattttgaacattcttctcctgtgagt
cctaatatgcactcctgtcagaagtatctttccaattggagattacctggaagagattgg
gaaaaggcttatggaagctcagagcttaagtttggacataaagcttttaaacagaagtac
gtttctgttgaaaggcgtagaagatgcaaatcagctccaccttcttacaaaagaaaaact
agtttctattgcctgtaccaaagaaaggaagaaaagcataatgccgcgggtttctatggc
cttgaccaaagaaaaactgataagtttaatgccacaaatttctattgcatggaccaaggg
aaagatgaaaagcttagggcatcggccttccttgacagcccacctcatttagaactaggt
cagctgagagattccaaacatttctctggtactaataatctttatattaacccaagtcct
cttgatgacttatcgatgggaactagaacagatatgacaaagatgcctactattacggga
aataataaagagaaacaagaaggaaaagtttccaagcagttccaatccgatgttaaagtt
actgcatctgctttagaattatgctcaaaggaaactcaagagtcatatttatggatcaaa
tggaaaaattgctgtccgactacaagaaatgatgggccacgtgcttttgaagatgaagtt
agtatacttgatatctcttcaggattcctatctcttgccagaaattccttagttcccaaa
tccatcgataagaatttccttgaagatgccaaagttcttctacagcttgataagaaattc
attccagttgtttctggtggaatactggctgttattgatcagcatgctgcagatgaaaga
atccgacttgaagatcttcgtcaaaagttgttgtctggtgaagcaaagacaatagcctat
ctggaggatgaacatgaactggtgctgcctgaaattgggtaccagttgttgtacaactat
agtgatcaggttaaagagtggggttggatctgtaatattcatgctcaagattcaaaatgc
ttccaaaggaatttgaatatcctatacaagcaggaaacggtcatcacgctaatggcagta
ccttgcatactaggtgttaatttatctgatgcagatctactggagtttcttgatcagctt
gctgatacagatggctcatcaacaatgccgccatccgtgcttcgagttcttaattcaaag
gcctgcagaggtgcaattatgtttggagactctttgttaccttcagagtgttcccttatt
gttgaagaactgaagcagacttctctgtgtttccaatgcgcccatggacgaccaactaca
gtacctctcgtgaacttggaggcattgcacaagcagataagggagatggaaatattagat
aaaaatggtttgaatggaacgtggcatgggctgcgacgacatgagctgagcattgaacgg
atgttgcagcacgtaggttcagcctaa
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