Cucurbita maxima (winter squash): 111470620
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Entry
111470620 CDS
T05246
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111470620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111470620
03036 Chromosome and associated proteins [BR:
cmax03036
]
111470620
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111470620
Coactivators
SAGA/TFTC/STAGA complex
111470620
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111470620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
TAF
Motif
Other DBs
NCBI-GeneID:
111470620
NCBI-ProteinID:
XP_022971951
UniProt:
A0A6J1I4L6
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSKAPASDAAFPRGSNGPSS
LPLQASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQPQ
SDCEQGDAEQVSAQFSQTPGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMVS
EQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
DQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYIP
SSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEKQ
QLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQVKQISQQASNFDRQVTIND
PKRVQGGNVSHLRNNLTSQPSPWKSSTSKEQTTGPLSSMSYIKQEPSDQVSEQNKTQHSN
LQGLSSIPSMQSEQVNTTPGISKDPFEKQTSKVTFPTSNNVMPQSSTNAANPISSDASSL
PESSAVLSSQVPSATTPGMQNRAPQKKAAVGQKKALEALGSSPPLSSKKQKVSGAFSDQS
IEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKKLME
IMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVRQQI
MLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDLAGDKDKDEGRMKSVKVNKEEDDKMRTT
AANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDAVRKSSSAAGRHGKD
NQEGDRKGTSKKFGRNQMNASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNKVRSE
ATGE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacccctctattatgaagcttctggaggatgacgaggatgaaacgatgcattcgggt
gcagctgtggaggcttttcaggctgccttgaatagagacatagaaggtgatgttccggct
gtttccaaggctcctgcgtcagatgcagctttccctcgagggagcaatggtccatctagc
ctcccgttacaagctagtcaaaatgaaaagactgaatctcatgcacaacaagatcaaaat
tttcgtccgaagcaagaacaacattcatctctgatggaactagagcgatgttcatcatta
cctgaaaatcagcagcaacataatgctgctccccttcaagcttcaaagaatcaaccccaa
tctgattgtgaacaaggggatgcagagcaagtttctgctcagttttctcaaacaccaggg
ctgcaaggttctgaaaaagctccaatccttgtgaatgattccaacagaatgcagaatcgg
gataatgaatctcaatacctgaagttacaaaagatgagtaatcagcagacaatggtctca
gaacaggcaaataacccattaaatcgtagtaaacaggtaccttttgcctcgttgatgcct
gtattgatgcctcagcttgataaagacagagccatgcagcttcagactttatttaacaga
ttgaagaggaatgaaatgaacaaagatgattttatacggctcatgaggggtgttgtgggt
gatcagatgctcagattagcagtttgtcaagtacaagcacagcctccaccttcagtcagg
caactttctccaagaatgccatctatgggccctggtgcaccaaatttctctgacccacga
ccattttcacaacttcatcagaaaggcatgaattctcctgctgttcaatcatatatcccc
tcttcagcatcccaagggcggagtagttcaggctatcctgccatggacaagaatatgcaa
tctctacgagaagtagaacagcgaacggatggtaatgcaaatcaattgacttcatccagt
tcaggcaccatccaggaaagggaacgctcctcaattcctgttccaggacttgagaagcag
cagctacactttcaacagaaatctttccccatgtatggaaacagtggtaattatcaccca
tatactgggtcaaacataaatacctcttcgttatctcttaaaccccaaccccatgagggt
caagtgaagcaaatttcccagcaggcttccaattttgataggcaagttactataaatgat
ccgaagcgagtccagggcggaaatgtttcacacttgcgtaataacttaacttcacagcca
agtccctggaagtcttcaacaagtaaagagcagaccacaggccctttatcttcaatgagt
tacattaaacaagaaccttctgatcaggtttctgagcagaacaaaacccaacattcaaat
ttgcagggattgtcttctattcctagcatgcagtctgaacaagttaacacaacccctgga
atttcgaaggacccttttgaaaagcaaacttctaaagtaacttttcctacatcaaacaat
gttatgcctcaatcatcaaccaacgcagcaaatccaatttcttctgatgcaagttctcta
cctgagtctagtgctgtgttaagctctcaggttccatctgcaactactcctggaatgcaa
aatagggcacctcaaaaaaaagctgccgtgggccaaaagaaggctcttgaagcacttggc
tcttcaccacccttatcaagtaagaagcaaaaggtatctggggctttttcggatcaaagc
attgaacaacttaacgatgtcactgcagtcagtggagttaatattcgggaagaagaagaa
caactattttctagtgcaaaggaggatagtcgagcttctgaagcatcacggaaggttgta
caagaagaagaagagaggctgctattgcagaaagccccattgcagaaaaagctgatggaa
atcatggctaaatatggtttgaagagcatgagcaatgacgttgagaaatgtctctcattg
agtgtggaggaaagattacgtgggattattagtaatctaatcaggctgtcaaagcagcga
gtggacactgagaaaccaaggcaccgaacacatattacttcagatgttcgacaacaaatt
atgttagttaaccaaaaggccagagaagaatgggagaagaaacaggctgaagaagaaaaa
ctccgtaagcttaatgatcctgaggatggttcagaccttgctggtgacaaggacaaagat
gaaggtcgaatgaaatcagttaaggtaaacaaagaggaggacgataaaatgcggacaaca
gcagcaaatgttgctgcccgtgctgctgttggaggagatgacatgctatccaaatggcaa
cttatggctgagcaagcgcgacagaaacgtgaaggtggaatggattctgcttctggttct
cagtcggggaaagatgctgtccgtaagtcttcatcagcagcaggaagacatggaaaggac
aaccaagaaggtgataggaaaggaacttccaaaaaatttggaaggaaccaaatgaatgca
agtcaaactagggtggctcgtagtatttctgttaaagatgtcatcgccgtgctgcaaaga
gaaccccagatgtccagatccaccacaatatatcgtttgttcaacaaagttcgttccgaa
gccaccggtgaatag
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