KEGG   Cucurbita maxima (winter squash): 111470797
Entry
111470797         CDS       T05246                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111470797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111470797
   03009 Ribosome biogenesis [BR:cmax03009]
    111470797
Enzymes [BR:cmax01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     111470797
Spliceosome [BR:cmax03041]
 Complex A
  U1 snRNP components
   U1 related factors
    111470797
 Complex B
    111470797
Ribosome biogenesis [BR:cmax03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    111470797
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C RSRP
Other DBs
NCBI-GeneID: 111470797
NCBI-ProteinID: XP_022972187
UniProt: A0A6J1I960
LinkDB
Position
Unknown
AA seq 1149 aa
METGESAPPYLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
LAPHSSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
SSVADQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPISSQHISQQQVMHQGQKMAHA
NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYMGYQQ
SVHPSVQQVQQSPLGQPFGNHLEQKSAFQKREEDKIQSGNQIGFSTSQFQQSGGTSSIHS
VHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRFQDPMG
PAAMQEKQTGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMSGVPFPS
VAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEV
TATGDNVPAPFMTFEATGFPPEILREIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGS
GKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYG
GAPKGPQLKELDRGADIVVATPGRLNDILEMKMIDFRQVSLLVLDEADRMLDMGFEPQIR
KIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQ
MEKHRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLN
QFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFF
CEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRSALGRFDAAMGDSRWDSGG
RGGMRDGGFGGRGGARDGGFGGRGGARDGGFGGRSGMRDGGFGGRGGMRDGLAGGRGGRG
DFFSGRGRGRAFGGPPGGHVGWGRGDRGGPQDRYNSVDGRGRGRGQGRFDNRRDFSHRSR
GRSYSRSPERVRTWGYSRSRSRSSSRSSRSWSQSRSRSRSRSRSRSWSRRYSRSRSRSRS
RSHDNHERSREKNFDRKDDVPPESVTATSPGTRKNAFETREDGRQLPPADSNNIEPGNPE
NGADTNDQL
NT seq 3450 nt   +upstreamnt  +downstreamnt
atggaaactggggagtctgctcccccttaccttggtcctcgctatgcaccggacgaccct
actcttcccaaaccttggaagggattgattgatgggagcactggactgttgtactactgg
aaccctgaaaccaacgttactcagtatgaaaaaccggtctctttgccaccaccattacca
ctcgctcctcattctagtgcctctacttccaagcctacttcaatcccggagggtcattca
atgccatcaaatggcacactaacccctcatgtacagcaaaatcatcatgtccctcaacag
gaaggccaatcaaacagccagctttctcaacaacctggacatctgatgtcacaacagcac
agttctgttgcagatcaggcaattgttaatcaccatcctagcatgcaaatggcaccagat
gggcgacaacatagcgtgcagccgaaccaggttttgcagcaacaggggatgtttccgata
tcgtcgcagcatattagccagcagcaggtcatgcatcaaggtcagaaaatggcacatgct
aatcaacaaatatctcagcatcctaaccagcaacctctgcagaatccaggccaacaaata
ccacagccctcaatccagcatttaggacagccaaacatgcaaaatcaaaccccattagtt
ggccagcctcaaggtccgcaatatggtcagcagcagcctcagtatatgggttaccagcaa
agcgtacatccaagtgtgcagcaagttcaacagagccctttaggacaaccatttggtaat
caccttgagcagaagtcagcttttcagaagagagaggaggacaagatccagtcaggaaac
caaattggattttctacttcccagtttcaacaaagtggtggtacatcatctattcatagt
gttcatcctggaaccaattcttctcaaatgcaacaatacggtttaccttctgatcaagca
cgacagtttggtggttctccaggaaacatgcaacagccgcatcctgtggttcaattgcag
cattcaggtactgaattgactcatcgccaacatcattctagattccaagatccaatgggc
ccagctgcgatgcaggagaagcaaactggttctgaaaatttgccaggcagagctggaaat
gaatatttctttggcaggaatgaggggcctggaattggtccacatcaaccaaggcttgca
gcaataccaatggcaaggagccagcaggatacaaggatgagtggtgtcccatttccaagt
gtggcacccggtcatcctagtggaacaagttttgcagccgggcaatcacataatatgtac
aaccatgggtctggtggtccatcattgtcaaacaatgctttgatgggccctccccatatt
ggagcttcagatgttactaatatgtcacctgttgaagtttatcgtcaacagcatgaagta
actgccacgggtgataatgttccagctccattcatgacatttgaggctactggcttccct
ccggagatactgagagagatatattctgctggtttctcatctcccacgccaattcaagca
caaacatggccgattgccctgcaaggtagagacatagtcgcaattgctaaaacagggtct
ggaaaaactttgggctatttgattcctgctttcgttcttctaaggcagtgccgaaataac
cctcaaaatggaccaacggtgttggttttggctcctactagggagcttgctactcaaata
caagatgaggcaattaaatttgggagggcttccaggatttgttgtacctgcttgtatggt
ggtgctccaaaaggtcctcagcttaaagagttagatcgtggggctgatattgttgtggca
actcctggccgacttaatgatatactagaaatgaaaatgatcgactttaggcaagtttca
cttcttgtgcttgatgaagctgatcggatgcttgacatgggatttgaaccccaaattaga
aagattgtgaatgaaataccaccacgcagacaaactcttatgtatacagcgacctggccc
aaggaagtaagaaaaatagcaaatgatcttcttgtcaattctgtccaggtgaatattgga
agcgttgatgaacttgccgctaacaaggctatcacacagtatgttgaagtcgttccacag
atggaaaaacacagacggttggagcagatcctcaggtcccaggaacgggggtctaaggtt
ataattttttgttccacaaagagattgtgtgatcagcttgcacggaatcttgggcgtggg
tttggggctgctgccattcatggagacaaatcacaaggagagcgtgattgggtattgaac
cagtttcgtagcggaaagtccccgatactagtcgccacagatgttgctgcccgcgggctt
gacatcaaagatataagagtggtgatcaactttgattttccaactggaattgaggactat
gtccaccgaattggtagaactgggagggctggagcaacgggaatggcctataccttcttt
tgtgaacaggattggaaatatgctgctgatttgattaaagtactggagggtgcggatcag
cttgtgcctcctgagttgcgagatatggctatgcgtgggggtccgagttttggtaaggat
aggagcgctttgggtcgtttcgatgcagctatgggtgacagccgctgggattctggaggc
cgaggtggcatgagagatggcgggtttggtggtcgtggtggtgcaagagatggcgggttt
ggtggtcgtggtggtgcaagagatggcgggtttggtggccgcagtggaatgagagatggt
gggtttggtggccgtggtggaatgagagatggtcttgctggtggacgaggtgggagaggt
gatttcttctctggacgaggtagaggacgggcctttggtggccctcctggaggtcatgtt
ggttggggcaggggtgatcgtggtggcccacaggataggtacaatagtgtggatggacgt
gggcgtggacgtggacagggtcgatttgataacagaagagacttctcccataggagtaga
ggcagaagttatagtcgtagccctgaaagagttcgaacatggggttacagtcgaagtcgc
agtcgtagcagtagtcgtagtagtagaagttggagtcaaagtagaagtcgcagcaggagc
aggagcaggagcaggagctggtcacgtcgctatagccgaagccgtagccgtagccgtagc
cgtagccatgataatcacgagcgatcacgtgagaagaacttcgatagaaaagacgacgta
cctccagaatcagtaactgctacttctccgggcacacgaaagaatgctttcgaaacaaga
gaagatgggaggcagcttcctccagctgacagtaacaacatcgaaccggggaacccagaa
aatggtgcagatacgaacgatcaattgtaa

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