Cucurbita maxima (winter squash): 111470797
Help
Entry
111470797 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
3.6.4.13
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111470797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111470797
03009 Ribosome biogenesis [BR:
cmax03009
]
111470797
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
111470797
Spliceosome [BR:
cmax03041
]
Complex A
U1 snRNP components
U1 related factors
111470797
Complex B
111470797
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
Helicases
111470797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
RSRP
Motif
Other DBs
NCBI-GeneID:
111470797
NCBI-ProteinID:
XP_022972187
UniProt:
A0A6J1I960
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
METGESAPPYLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYEKPVSLPPPLP
LAPHSSASTSKPTSIPEGHSMPSNGTLTPHVQQNHHVPQQEGQSNSQLSQQPGHLMSQQH
SSVADQAIVNHHPSMQMAPDGRQHSVQPNQVLQQQGMFPISSQHISQQQVMHQGQKMAHA
NQQISQHPNQQPLQNPGQQIPQPSIQHLGQPNMQNQTPLVGQPQGPQYGQQQPQYMGYQQ
SVHPSVQQVQQSPLGQPFGNHLEQKSAFQKREEDKIQSGNQIGFSTSQFQQSGGTSSIHS
VHPGTNSSQMQQYGLPSDQARQFGGSPGNMQQPHPVVQLQHSGTELTHRQHHSRFQDPMG
PAAMQEKQTGSENLPGRAGNEYFFGRNEGPGIGPHQPRLAAIPMARSQQDTRMSGVPFPS
VAPGHPSGTSFAAGQSHNMYNHGSGGPSLSNNALMGPPHIGASDVTNMSPVEVYRQQHEV
TATGDNVPAPFMTFEATGFPPEILREIYSAGFSSPTPIQAQTWPIALQGRDIVAIAKTGS
GKTLGYLIPAFVLLRQCRNNPQNGPTVLVLAPTRELATQIQDEAIKFGRASRICCTCLYG
GAPKGPQLKELDRGADIVVATPGRLNDILEMKMIDFRQVSLLVLDEADRMLDMGFEPQIR
KIVNEIPPRRQTLMYTATWPKEVRKIANDLLVNSVQVNIGSVDELAANKAITQYVEVVPQ
MEKHRRLEQILRSQERGSKVIIFCSTKRLCDQLARNLGRGFGAAAIHGDKSQGERDWVLN
QFRSGKSPILVATDVAARGLDIKDIRVVINFDFPTGIEDYVHRIGRTGRAGATGMAYTFF
CEQDWKYAADLIKVLEGADQLVPPELRDMAMRGGPSFGKDRSALGRFDAAMGDSRWDSGG
RGGMRDGGFGGRGGARDGGFGGRGGARDGGFGGRSGMRDGGFGGRGGMRDGLAGGRGGRG
DFFSGRGRGRAFGGPPGGHVGWGRGDRGGPQDRYNSVDGRGRGRGQGRFDNRRDFSHRSR
GRSYSRSPERVRTWGYSRSRSRSSSRSSRSWSQSRSRSRSRSRSRSWSRRYSRSRSRSRS
RSHDNHERSREKNFDRKDDVPPESVTATSPGTRKNAFETREDGRQLPPADSNNIEPGNPE
NGADTNDQL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggaaactggggagtctgctcccccttaccttggtcctcgctatgcaccggacgaccct
actcttcccaaaccttggaagggattgattgatgggagcactggactgttgtactactgg
aaccctgaaaccaacgttactcagtatgaaaaaccggtctctttgccaccaccattacca
ctcgctcctcattctagtgcctctacttccaagcctacttcaatcccggagggtcattca
atgccatcaaatggcacactaacccctcatgtacagcaaaatcatcatgtccctcaacag
gaaggccaatcaaacagccagctttctcaacaacctggacatctgatgtcacaacagcac
agttctgttgcagatcaggcaattgttaatcaccatcctagcatgcaaatggcaccagat
gggcgacaacatagcgtgcagccgaaccaggttttgcagcaacaggggatgtttccgata
tcgtcgcagcatattagccagcagcaggtcatgcatcaaggtcagaaaatggcacatgct
aatcaacaaatatctcagcatcctaaccagcaacctctgcagaatccaggccaacaaata
ccacagccctcaatccagcatttaggacagccaaacatgcaaaatcaaaccccattagtt
ggccagcctcaaggtccgcaatatggtcagcagcagcctcagtatatgggttaccagcaa
agcgtacatccaagtgtgcagcaagttcaacagagccctttaggacaaccatttggtaat
caccttgagcagaagtcagcttttcagaagagagaggaggacaagatccagtcaggaaac
caaattggattttctacttcccagtttcaacaaagtggtggtacatcatctattcatagt
gttcatcctggaaccaattcttctcaaatgcaacaatacggtttaccttctgatcaagca
cgacagtttggtggttctccaggaaacatgcaacagccgcatcctgtggttcaattgcag
cattcaggtactgaattgactcatcgccaacatcattctagattccaagatccaatgggc
ccagctgcgatgcaggagaagcaaactggttctgaaaatttgccaggcagagctggaaat
gaatatttctttggcaggaatgaggggcctggaattggtccacatcaaccaaggcttgca
gcaataccaatggcaaggagccagcaggatacaaggatgagtggtgtcccatttccaagt
gtggcacccggtcatcctagtggaacaagttttgcagccgggcaatcacataatatgtac
aaccatgggtctggtggtccatcattgtcaaacaatgctttgatgggccctccccatatt
ggagcttcagatgttactaatatgtcacctgttgaagtttatcgtcaacagcatgaagta
actgccacgggtgataatgttccagctccattcatgacatttgaggctactggcttccct
ccggagatactgagagagatatattctgctggtttctcatctcccacgccaattcaagca
caaacatggccgattgccctgcaaggtagagacatagtcgcaattgctaaaacagggtct
ggaaaaactttgggctatttgattcctgctttcgttcttctaaggcagtgccgaaataac
cctcaaaatggaccaacggtgttggttttggctcctactagggagcttgctactcaaata
caagatgaggcaattaaatttgggagggcttccaggatttgttgtacctgcttgtatggt
ggtgctccaaaaggtcctcagcttaaagagttagatcgtggggctgatattgttgtggca
actcctggccgacttaatgatatactagaaatgaaaatgatcgactttaggcaagtttca
cttcttgtgcttgatgaagctgatcggatgcttgacatgggatttgaaccccaaattaga
aagattgtgaatgaaataccaccacgcagacaaactcttatgtatacagcgacctggccc
aaggaagtaagaaaaatagcaaatgatcttcttgtcaattctgtccaggtgaatattgga
agcgttgatgaacttgccgctaacaaggctatcacacagtatgttgaagtcgttccacag
atggaaaaacacagacggttggagcagatcctcaggtcccaggaacgggggtctaaggtt
ataattttttgttccacaaagagattgtgtgatcagcttgcacggaatcttgggcgtggg
tttggggctgctgccattcatggagacaaatcacaaggagagcgtgattgggtattgaac
cagtttcgtagcggaaagtccccgatactagtcgccacagatgttgctgcccgcgggctt
gacatcaaagatataagagtggtgatcaactttgattttccaactggaattgaggactat
gtccaccgaattggtagaactgggagggctggagcaacgggaatggcctataccttcttt
tgtgaacaggattggaaatatgctgctgatttgattaaagtactggagggtgcggatcag
cttgtgcctcctgagttgcgagatatggctatgcgtgggggtccgagttttggtaaggat
aggagcgctttgggtcgtttcgatgcagctatgggtgacagccgctgggattctggaggc
cgaggtggcatgagagatggcgggtttggtggtcgtggtggtgcaagagatggcgggttt
ggtggtcgtggtggtgcaagagatggcgggtttggtggccgcagtggaatgagagatggt
gggtttggtggccgtggtggaatgagagatggtcttgctggtggacgaggtgggagaggt
gatttcttctctggacgaggtagaggacgggcctttggtggccctcctggaggtcatgtt
ggttggggcaggggtgatcgtggtggcccacaggataggtacaatagtgtggatggacgt
gggcgtggacgtggacagggtcgatttgataacagaagagacttctcccataggagtaga
ggcagaagttatagtcgtagccctgaaagagttcgaacatggggttacagtcgaagtcgc
agtcgtagcagtagtcgtagtagtagaagttggagtcaaagtagaagtcgcagcaggagc
aggagcaggagcaggagctggtcacgtcgctatagccgaagccgtagccgtagccgtagc
cgtagccatgataatcacgagcgatcacgtgagaagaacttcgatagaaaagacgacgta
cctccagaatcagtaactgctacttctccgggcacacgaaagaatgctttcgaaacaaga
gaagatgggaggcagcttcctccagctgacagtaacaacatcgaaccggggaacccagaa
aatggtgcagatacgaacgatcaattgtaa
DBGET
integrated database retrieval system