KEGG   Cucurbita maxima (winter squash): 111470881
Entry
111470881         CDS       T05246                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like
  KO
K11797  PH-interacting protein
Organism
cmax  Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmax04121]
    111470881
Ubiquitin system [BR:cmax04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111470881
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Bromodomain Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_DCAF4 VPS8_N Beta-prop_HPS5 WD_LRWD1 Beta-prop_WDR35_TULP_N Auxin_resp WDR90_beta-prop_4th Agenet
Other DBs
NCBI-GeneID: 111470881
NCBI-ProteinID: XP_022972302
UniProt: A0A6J1I4G1
LinkDB
Position
Unknown
AA seq 1722 aa
MTNMALRKFVYGDTPSINLKRSSLPIKAHQQTRFEELETNQTSEPDVEIDLREVYFLIMH
FLSSGPCHRTCGLLWDELFEHQLLPRRYHAWFSRNGMQSGHENDDGSSFPLKYQHLVERY
SHVDKDHLIKLLKQLMLSKASPSGGMNGAIAPNAADVPTLLGTGTFSLLSYDKNEGASKP
SGPPAHMRWPHMKADSVRGLSLREIGGGFSRHQRAPSVRAACYAIAKPSTMVQKMQNIKR
LRGHRNAVYCAIFDRMGRYVITGSDDRLVKIWSMDTAYCLASCRGHEGDITDLAVSSNNA
VVASSSNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRAAYQLLSSSDDGTCRIWDAR
SSSQSAPRIYVPRPLDSVTAAARNSVSSVSTLPQSHQIFCCAFNACGTIFVTGSSDTLAR
VWSAYKGNNDNPDQPNHEIDVLAGHENDVNYVQFSGCAVASRFTTTDIAKEDNVHKFKNS
WFTYDNIVTCSRDGSAIIWVPRSRRSHGKVGRWTRAYHLKVPPPPMPPQPARGGPRQRIL
PTPRGVNMIIWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPSNPRI
AMSAGYDGKTIVWDIWEGTPIRIYEISHFKLVDGKFSSDGTSIILSDDVGQLYILSTGQG
ESQQDAKYDQFFLGDYRPLIQDPSGNVVDQETQLTTYRRNLQDLLSDSGMIPYPEPYQTA
YQQRRLGAMGLEWRPSSLKISVGPDFNLDPDYQLLPLIDLDMLIEPLPEIVDAMDWGPEN
EVQSDDTDSEYNVPEDYSTGGEQRSLNSNCSTDPECSSEDTGIDDAPADGLRRSNRKKQK
ADMEVMTSSGRRVKRRNMDEYEGDIVRSSRSQKSKSGHKPSKKKSASKLLRPQRAAARNA
RNWISSFKGKSTDGEDEYNSGGDCSESESTLEDSDIESDEYKRSLQNRNKHSKGKEVFVD
GIEETKSLDVPESRVDVGNRKKLILKFSLRNPNKVDPPLNTTLTCSNMAVVASSSSRSPK
EDIETSQILMRSERQFGNTDGHSDLTEVYTNGNIRWGGSRVRSSKRIRLGETMPSEAYAA
MSSSLPDGDHNENENDVRESLEQENHFGTPSPHSKMENYCAEKMGDGDDDASGKSQEVVN
GGDVKRVNSKSSDHDDSNNLNLMFPSDATTTSVQNGSTASEQTGNIAPMRAKIRLRSVSL
DPEHSLKHKIESLDESSKNDEYNTVFGSPRHLNVLQEDVMNGAYSDHRNDCPQDIDTPND
EKLMSTLCNSDELQAVETNKMFTAVYRRSKSNKGKSNAESNGCGSGENASGNISLPAEAD
DHKSMPRKTRSLRFKDASYELNNVGDDLKSDKDQESEHRSRRSANFSANRSHIPSEEWGS
SSRMTVGSRSTRNRRSSFTQDINPVERRRSVQYARKGSWLMMPAHEGGSRYIPQLGDEVA
YLRQGHQEYIDHCCTNYCHTKDTGPWTSIRGPVRAVEFCKVVELVYSTSAGSGDSCCKML
LKFIDPTSHVYLQSLKLTLPELTSFPDFLVERTRFEAAMQRNWTFRDKCKVWWKNDVGVD
GSWWDGRIVSVQAKSSEYPESPWERYTIKYRSDPAEPHLHSPWELYDTVTQWDQPRIGDE
NKAKLLTAFDQLTSTSMQGRYGIQDLMLLARKTQYKNRFPVPLCLEIIQERLQNDYYRSL
EALKHDFMVMLSNFESFVAKNEDMSKKIRRLSDWFSRNISPL
NT seq 5169 nt   +upstreamnt  +downstreamnt
atgactaatatggctcttcgaaagtttgtttatggtgatacaccttccattaacttgaaa
cgttcaagtctccccattaaggcgcatcaacaaactcgatttgaagaacttgaaactaac
cagacatcggagcctgatgtagaaattgaccttagagaagtttattttcttatcatgcac
tttctttcatctgggccatgtcatagaacttgtgggctgctctgggatgagctttttgaa
catcagcttttaccccgacgatatcatgcttggttttctagaaatgggatgcaaagtggg
catgaaaatgacgatggctcgtcatttcctttaaagtaccagcacttggtggagaggtat
tcacatgtcgataaggaccacctgataaaacttttgaagcaattgatgcttagcaaggcc
tctccatctggaggtatgaatggtgcaattgctccaaatgcagctgacgtgcctacatta
ttaggaacgggcacattttcacttctgagctatgataaaaatgagggagctagcaagcca
agtggtcccccagcacacatgcgttggcctcatatgaaagctgattctgttcgtggatta
agtttgagagaaattggaggtggtttctcccgacatcaacgtgcaccttctgtacgtgca
gcatgttatgcaattgctaagccatcaacaatggtgcagaaaatgcaaaacataaagagg
ctacgagggcatcggaatgctgtctattgtgcaatttttgatcgcatgggaagatatgtg
ataactggatcagatgatcgccttgtaaagatttggtcaatggatactgcatattgcttg
gcaagctgccgaggacatgagggtgatatcactgatctggctgtaagttctaacaatgct
gtggtggcatcatcttcaaatgattttgttatccgtgtttggcgcttgcctgatgggcta
ccaatttcagtcttgcgaggacatactggtgctgttactgccattgccttcagtcccaga
gctgcatatcagcttctttcatcgtcagatgatggaacatgtaggatatgggatgctcgg
agctcttctcagagtgctcctcggatttatgttccaagacctttggactctgtgactgct
gcagcaagaaacagcgtctcttccgtgagtactcttcctcagagccatcaaatattttgc
tgtgcatttaatgcttgtggaactatttttgttactggtagttctgacactttagccagg
gtatggagtgcctataaaggaaataatgataaccctgaccaaccaaatcatgagattgat
gtgttggctggccatgagaatgatgtcaactatgtgcaattcagtggatgtgcagtagcg
tcaagatttacaacaactgacattgcgaaggaagacaatgttcacaagttcaaaaactcc
tggttcacttacgacaatatagttacttgttctcgtgatggcagtgcaattatttgggtt
ccaagatcacgtaggtcacatgggaaggttggccgctggacccgtgcataccatttaaaa
gtgccacctccacccatgcctccacagcctgctcgaggcggtcctcgtcagaggattctt
cctactcctcgtggtgtaaatatgataatttggagtctagacaatcgttttgtcttagca
gctataatggattgtagaatttgtgtttggaatgcttctgatggaagcttagtgcactct
ttgactggtcatactgaatctacgtatgtactcgatgttcatccttctaatccaaggatt
gctatgagtgctggatatgatgggaaaacaatagtttgggatatttgggaaggcacacca
attcggatatatgaaatttctcatttcaaactggtcgatggcaagttttcatcagatggg
acatcaattatactttcagatgatgttggacagctatatatattaagcacagggcaagga
gaatcccaacaggatgccaagtatgatcagttctttctcggtgactatcgcccacttatt
caggatccttctggcaatgtcgtcgaccaggaaactcaactcactacttacaggcggaat
ttgcaagatctcctttctgactcaggcatgataccttatccagaaccttatcagactgca
taccagcaaaggcgtttgggtgccatgggtctggaatggcgtccatcttctctaaaaatt
tctgttgggcccgacttcaatctcgacccagattaccaattgttgcctttgatagacttg
gacatgttgattgaaccattgcctgagattgtagatgcaatggattggggaccagaaaat
gaagtacaaagcgacgataccgattcagaatataatgtccctgaagattattctactggt
ggggagcaaagaagtctaaattcgaactgctcaactgatccagaatgcagctctgaagac
acagggatcgacgatgcccctgctgatggtcttcgaagatcaaataggaaaaaacagaaa
gcagacatggaggtcatgacttcttcaggaaggcgtgttaaaagacggaatatggacgag
tatgaaggtgatatagttaggagttccagaagccagaagtcgaaatctggccataagcct
tccaaaaagaaatcagcatctaagttgttaagacctcaaagagctgctgcacgtaatgcc
cgtaattggatatcatcatttaagggaaaatctacagatggagaagatgaatacaactcg
ggaggtgattgctcagaaagtgaatctacgttagaagattcagacatcgagagcgatgaa
tacaaaaggtcattgcaaaacagaaataagcattcaaaagggaaagaagtatttgtagat
ggaatcgaggagacaaaatctcttgatgttcctgaatctcgtgtggatgttggaaaccga
aagaagttgattcttaaattctcccttcggaatccgaataaggtcgatcctcctttaaac
acaacacttacttgttccaacatggctgttgtggctagctcatcatcaaggtccccaaag
gaagatattgaaaccagtcagattcttatgagatcagagaggcaatttggaaatactgat
ggacattctgatctgaccgaggtctacacaaatgggaacataagatggggaggttccagg
gttcgttcatcgaagcgcataagattaggcgaaactatgccttctgaggcatatgctgca
atgtctagttcgcttcccgatggcgatcataatgaaaatgagaacgacgttcgtgaatct
ttagaacaagaaaatcattttggtactccatccccccattcaaagatggagaattattgt
gcagagaaaatgggcgatggggatgatgatgcttctgggaaatctcaggaggttgtcaac
ggtggagacgttaaacgtgtcaacagtaagtcgagtgatcatgatgattcaaataatttg
aatttaatgtttccttcagatgcaacgaccacatcggttcaaaatgggagcactgcttct
gagcaaactggaaatattgcaccaatgcgtgcaaagatcaggttgaggagtgtttctttg
gaccctgaacattctctgaagcacaaaatagaatccttggatgaaagctcaaagaatgat
gaatacaatacggtgttcggaagccctcggcatctgaatgtgctgcaggaggatgtcatg
aatggagcttattctgatcatagaaatgattgcccacaagatatagatactccaaatgat
gaaaaactaatgtcaaccttgtgcaactctgatgagttgcaagcagtagagactaacaaa
atgttcactgctgtttatagaagatcgaagtcaaacaaaggaaagagtaatgcagaaagc
aacggttgtggctcaggtgaaaatgcttcgggcaacattagtctacctgctgaagcagac
gatcacaaaagtatgcctcgtaagacacgatctttgaggtttaaggatgcctcatatgaa
ctaaataatgtgggtgatgatcttaaatcggacaaagatcaggaatctgaacatagatca
agacgttctgcaaatttttctgcaaacagatcccatataccaagtgaagagtggggatca
agctcaaggatgacagttggatcgagatccactcgtaacaggaggagtagttttactcaa
gacataaatcctgtggaaagaagaaggtcggttcaatatgcccgaaaaggatcgtggtta
atgatgcccgcacatgagggtggctccagatatataccccaacttggggacgaagttgcg
tatttgaggcagggccatcaagaatacatagatcactgttgtacaaattactgtcacaca
aaagacaccggaccttggacctcaatccgaggacctgtacgagctgttgagttctgtaag
gttgtcgagcttgtttattctacttctgcaggttctggagatagttgctgtaaaatgcta
ctcaaattcatagatcctacttcccatgtctacctccaatctttgaagttaactctgccc
gagttgactagtttccctgacttcttagttgaaagaactcggtttgaagcggcaatgcag
aggaattggacattcagggataagtgcaaagtgtggtggaaaaacgacgtcggagtagat
ggtagttggtgggatggtcggattgtctccgtgcaggcaaaatcttcggagtatccagaa
agtccttgggagaggtacacaattaagtataggagtgatcctgcagaaccacatttacat
agtccttgggagctgtatgatactgttactcagtgggatcagcctcgaataggcgatgaa
aacaaggcgaagttgttaactgccttcgaccaattaacgtcgacttctatgcagggtcgt
tacgggattcaagatttgatgcttctcgcacgaaagacacaatacaagaacaggtttcct
gtaccattgtgccttgagataatccaggaaagattacagaatgattactaccgaagcttg
gaagctttgaagcatgacttcatggtaatgctatcaaatttcgagtcattcgtggcaaag
aatgaagacatgtcgaagaaaattagacgattgtcggactggtttagtcgcaacatatca
cctttgtag

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