Cucurbita maxima (winter squash): 111471037
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Entry
111471037 CDS
T05246
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111471037
09123 Folding, sorting and degradation
03018 RNA degradation
111471037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111471037
03041 Spliceosome [BR:
cmax03041
]
111471037
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111471037
mRNA cycle factors
Stress granule specific factors
111471037
Spliceosome [BR:
cmax03041
]
Complex C
Other components
Complex C specific factors
111471037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_ACIN1
RRM_MUD2_C
RRM_RdRP1_2
RRM_Nup35
PABC_AtC3H46
C16C6_04
GH97_C
Motif
Other DBs
NCBI-GeneID:
111471037
NCBI-ProteinID:
XP_022972489
UniProt:
A0A6J1IBQ1
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAQVPPQPQVPNSGADPAANGGGNQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRV
CRDLTTRRSLGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSMRKSGSGNIF
IKNLDKAIDHKALHDTFSAFGNILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGM
LLNDKQVFVGPFLRKQERESVSEKTKFNNVFVKNLAETTSEEDLRNMFGEFGPITSVVVM
RDGEGKSKCFGFVNFENADDAARSVDALNGNKVDGKEWYVGKAQKKSEREVELKNRFEQS
VKEAADKYQGANLYVKNLDDTIDDDKLKELFSAFGTITSCKVMRDPNGLSRGSGFVAFST
PEEASRALGEMNGRMIVSKPLYVALAQRKEDRRARLQAQFSQMQPMAMASSVAPRGMPMY
PPGGPGIGQQIFYGQAPPTIISSQPGFGYQQQLMPGMRPGGGPMPNFFVPMVQQGQQGQR
SGGRRAGAIQQSQQPVPMMQQQMLPRGRVYRYPPGRGLPDLPMPGVAGGMFSVPYEMGGM
PPRDAVHPQPVPVGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQ
TEVLHLLESPEALKAKVAEAMEVLRSVSQQTGNAAADQLASLSLTDNLDS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttccacctcaacctcaagttcccaactccggcgccgacccggctgccaat
ggaggcggaaatcagcatgtgacgacgtcgttgtatgttggagatcttgacgtgaacgtc
accgactcccagctttatgatctttttaatcaggtggggcaggtggtttctgttagggtt
tgcagggatttgacgacccgtcgatcgcttggttatggctatgtcaattacagcaaccca
gtggatgcttcgagggcattggatgtgctaaacttcacccctttgaatgggaatcctatt
agagtcatgtattcgcatcgcgaccctagcatgcggaagagtgggtctggaaatattttt
atcaagaacttggacaaggcaattgatcacaaagcgttgcacgatacattctctgcattt
ggaaacattctctcctgcaaggttgctacagattcgtctgggcagtctaaaggctttggt
ttcgtacaatttgatactgaggaagctgccttaaaagctatagagaagttgaatggtatg
ctgctcaacgacaagcaggtgttcgtgggacctttccttcgcaagcaagaaagagaaagt
gtcagtgagaaaacaaaatttaacaatgtttttgttaagaatttagcagaaactacatct
gaagaagatttgaggaatatgtttggggagtttggaccaattaccagcgttgtggtcatg
agggatggggaaggaaaatcaaaatgctttggctttgtgaactttgaaaatgcggacgat
gctgctagatctgttgatgctctcaatggaaacaaggttgatgggaaagagtggtatgtt
ggaaaagcccagaagaaatctgaaagggaagttgaactaaagaatcgatttgagcagagt
gtaaaagaagctgctgacaagtatcaaggtgcaaacttatatgttaagaatttagatgat
accattgacgatgataaactgaaggagttattctctgcatttggaaccattacctcatgc
aaggttatgcgtgatcccaatggactgagtagagggtctggctttgttgcgttctcaact
cctgaagaggcttctagagctcttggagagatgaatggaagaatgattgtgagcaaacct
ctttatgttgcacttgcacagaggaaggaagacagaagagctaggttgcaggcacagttt
tcccaaatgcagccaatggcaatggcatcttcagttgctcctcgtggcatgccaatgtat
cctccaggtggtccaggtattggacaacaaatattttacggacaagctccacctactatt
atttcatcacagcctggatttggttatcagcagcaactcatgcctggaatgaggcctggt
ggaggtccgatgccaaatttctttgttccaatggttcagcagggccagcaagggcaaaga
tctggtggaaggcgagctggtgctattcagcaatcccagcagcctgttccaatgatgcag
cagcagatgctaccaagaggacgtgtctaccgttatcctcctgggcgtggactgcctgat
cttcccatgcctggtgttgctggaggtatgttctctgttccatatgagatgggtggaatg
ccgccgcgggatgctgtccaccctcaaccagttcctgttggcgctttggcttctgccctt
gcaaatgcaactccagaccagcagagaacgatgcttggggaaaacctttatccacttgtg
gaacagctagagcctgataatgcggccaaggtaacaggcatgctattggaaatggaccaa
actgaggttctgcacttgctcgagtcaccggaagctctgaaggcgaaggttgccgaggcc
atggaggttttaagaagtgtttctcagcagacgggcaatgcagctgctgatcagttggct
tcattatctctgactgacaaccttgattcctaa
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integrated database retrieval system
