Cucurbita maxima (winter squash): 111471039
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Entry
111471039 CDS
T05246
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111471039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111471039
03036 Chromosome and associated proteins [BR:
cmax03036
]
111471039
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111471039
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111471039
PBAF complex
111471039
GBAF(ncBAF) complex
111471039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111471039
NCBI-ProteinID:
XP_022972492
UniProt:
A0A6J1I4Y3
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MEEKRRDARNLPANSTDSPSSEPPSSRRRAGAQKRKASTLGGSISSSAPSKRVTREKSAL
THPPNHNGPFTRARFGPNNVAGAASANGGLASAAESVKTEGSLLHSEVQRGDALVAAAEE
LNKATRLANMEASFEADFEAIKSRSANAHVVPNHCGWFSWTEVHPIEERSMPSFFSGKDG
TRSPDIYIKIRNWIMKKFHANPSTQLEAKDLSELEVGEQDARKEVMEFLDHWGLINFHPL
LSAESISTSDLDDESQKDSLVEKLFHFETLESCPSIVPKINVTTAAPPRLLRESAISEEL
TRPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESVG
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE
DNVEDGAKETVPPLTENDSSVPTDITESLDNKATEKEASNTETATKEDTGEVKVGLDNSK
SEDVEGKAALDNSKLEDGDQKVSEDIALNALREAFEAIGYVLTPEHPLSFADVGNPVMAL
AAFLARLVGSDVASASARFSLKSISQKSPSLELATRHCFILEDPPDVEKAKANSQSIVNV
ETQKNDKEQCAKQRPDNSTSVLDDGALSTNDSNNKNGELVTKETMDNENSSDAIIEHNPI
TNHDSDRTSNLKESREPELPEVERTGIVKECENVESKSTSNPVEKLGEGTSAEKSSQPKL
SPKDVHMSDLQHAEKTEIQKQVPSHSAKTKKELDDEPNHLPSANEPQPTISANSVKEASK
DVAIIPDSHNENEPAQTETSKSVVDQGASKVADSLPSAENATPLPVKPTSVIERGAADDN
QSKDNKEENSNCMSKKEDKIDKLKRAAVTTLSAAAVKAKILANQEEDQIRHLAMILIEKQ
LHKLESKLAFFNDMDNVTVRMREQLDRSKQRLFQERAQIIAARLGLPASSSRGGAPTLPT
NRMPMNFANTVPRPPMGMVPKRPPTSGLPGMAASNPNPQYPTTSTTISGSSFRPANQDTL
SSVGSK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagcgccgcgacgcccgaaatttaccggcaaacagcaccgattctccgtca
tcggagccgccttcttctcgtcgtcgagctggagctcagaagcgaaaggcaagcactctc
ggtggctctatctcctcatccgcgccctcgaaacgcgttactcgcgaaaaatctgcgctt
acacatcctccaaatcataacggccctttcaccagagctcgatttggccctaacaatgtt
gctggagcagcatcggctaatgggggacttgcctccgccgccgaatcagttaagacggaa
ggctctttacttcattccgaagttcagcgtggagacgcgttggtcgccgcggcggaggaa
ttgaacaaggcgactagattggcgaatatggaggcgtctttcgaagctgatttcgaagcc
attaaatctcggagtgcgaatgctcatgtcgttccgaatcattgcggttggttttcatgg
acagaagtccatccaattgaggaacgttcgatgccttcttttttcagtggaaaggatggc
actcgaagtcctgatatatatatcaagatacgtaattggattatgaaaaaattccatgca
aatcccagtacgcagcttgaagcaaaagatctatcagagctggaagttggagaacaagat
gctagaaaggaggtgatggagtttcttgaccattggggtttgattaattttcacccttta
ctatccgcagaatcaatttcaacaagtgatcttgacgatgaaagtcaaaaggactctttg
gttgagaagttgtttcactttgaaacattagaatcctgcccatctattgttccgaagatc
aatgttaccactgcagctccacctagattgcttagagaatctgcaatttctgaagagttg
acgaggcctgagggtccatctgttgagtaccactgtaactcatgctctgctgattgctct
cggaaacgttaccactgccagaagcaggcagattttgatttatgttcggagtgctttaac
aatgggaaatttgattccgatatgtcttcatcagattttattctcatggagtccgttggg
gttcctggtgctagtggaggtaagtggacagatcaggaaactctcctcctccttgaggct
ttagagctttataaggaaaactggaatgagattgctgaacatgtggccaccaaaacaaaa
gcccagtgtatattgcacttcattcaaatgccaattgaggatacctttcttgaatctgag
gataatgttgaagacggtgcaaaagaaactgttccacctttaactgaaaatgattcatca
gttcctactgatatcactgaatcattggataataaggctactgaaaaagaggcttcgaat
acagaaactgcaaccaaggaagatacaggtgaggtaaaagttgggctggataattcaaaa
tcagaggatgttgaaggaaaagctgctttagataactccaaattagaagatggtgatcag
aaggtttctgaagacattgccttgaatgctttgagggaggcatttgaagccattggttat
gtattaacacctgagcatccactttcatttgctgatgtagggaaccctgtcatggcattg
gctgcattccttgcacgcttagttggatcagatgttgccagtgcatcagcccgtttttct
ttgaaaagcatatctcagaaatctcccagtttagaactggctacaaggcactgctttatt
ttagaagatccaccagatgttgagaaggccaaagctaattcacagagtattgtcaatgtg
gaaactcagaaaaatgacaaggaacagtgtgcgaaacagagaccagacaattctacttca
gtcttagatgacggagccctatcaactaatgacagtaataacaaaaatggagaattggtg
acaaaggagactatggataatgaaaattcttcagatgctattatagaacacaatccaatt
actaatcatgattcagatagaacaagtaatttgaaagaatcgagagaaccagaattacct
gaggttgaaagaacaggcattgtgaaggaatgtgaaaatgtagaatcaaaatcgacatca
aatccagttgaaaagttgggagaaggaacttctgctgaaaaatcatcacaacccaagttg
tcaccaaaggatgttcatatgtcagatttgcaacatgctgaaaaaactgagattcagaag
caagttccatctcattctgccaaaactaaaaaagaattagatgacgagccaaatcattta
ccctctgcaaacgagcctcaaccaacaatttctgctaattcagtgaaagaagcctcaaaa
gatgtagccattatacctgattctcacaatgagaatgaacctgcacaaactgaaacgtct
aaatccgtggttgaccagggagcaagcaaggtcgctgattctttgccctcagcagagaat
gcaactccactaccagtaaaaccaacttcggttattgaaagaggagcagcagatgataat
caaagcaaggacaacaaagaagaaaactccaattgtatgagtaaaaaagaggataaaatc
gacaagttgaagcgtgctgcggttacgacactgtcagcagcagcagtgaaggcaaaaatc
ctggctaatcaggaagaggaccaaatccgtcatcttgccatgatattaatcgaaaaacag
ctgcataagttggaaagcaagttagcattcttcaacgacatggataacgtgacggtgaga
atgagggagcaactagacaggtcaaagcagaggcttttccaggaacgtgcacagataatc
gctgctcgactaggcttacctgcttcgtcatcacgaggtggggcaccaacattaccaaca
aacaggatgcccatgaactttgcaaacacagtcccaaggcctccaatgggcatggtgccc
aaaaggcctccgacatcgggactgccgggtatggctgcttctaaccctaacccccaatac
ccaacaaccagtacaacaatttctgggagttcatttcgccctgcaaatcaggacacactt
tcttctgttgggtcaaagtaa
DBGET
integrated database retrieval system
